Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0050700 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.7e-98 362.1 193 100.0
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.8e-41 173.3 150 60.7
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-40 170.6 150 60.0
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.0e-40 169.9 150 60.0
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.4e-40 168.7 150 60.0
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.8e-40 167.5 145 62.8
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.7e-39 166.8 145 60.7
Rhsim04G0059300 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.7e-39 165.6 143 62.2
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.1e-38 161.0 145 60.7
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 7.7e-37 157.9 145 58.6
RhsimUnG0131900 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.5e-35 152.9 149 55.7
Rhsim02G0144500 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.5e-35 151.8 150 56.7
Rhsim13G0113900 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-34 150.6 140 58.6
vmacro08892 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.2e-23 113.2 145 48.3
Rhsim01G0151700 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.4e-22 110.5 137 54.7
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.6e-21 107.1 166 41.0
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.7e-21 106.3 158 39.9
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.5e-19 99.8 147 41.5
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.3e-19 99.4 147 41.5
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.3e-19 98.2 147 40.8
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.2e-18 97.4 152 38.8
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.2e-18 97.4 147 40.8
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.6e-18 97.1 147 40.8
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 3.6e-18 95.9 95 61.1
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.2e-18 95.1 147 39.5
CSS0031455 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.8e-17 93.6 147 39.5
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-16 90.5 105 43.8
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-16 90.5 105 43.8
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.0e-16 90.1 147 38.8
Rhsim04G0178800 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.4e-16 89.4 105 42.9
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.8e-16 87.8 135 39.3
Actinidia04327 Actinidia chinensis HOM05D000034 ORTHO05D000037 3.7e-15 85.9 159 36.5
CSS0011764 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.7e-15 85.9 191 31.9
Actinidia33028 Actinidia chinensis HOM05D000034 ORTHO05D000277 6.4e-15 85.1 119 38.7
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.3e-15 84.7 169 33.1
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.3e-15 84.7 169 33.1
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.4e-14 82.0 169 33.1
Rhsim10G0122700 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-13 80.9 168 31.0
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.6e-13 80.5 154 30.5
Rhsim12G0012100 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.1e-13 80.1 120 36.7
CSS0026213 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.0e-13 78.6 148 33.8
CSS0043118 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.0e-13 78.6 205 30.7
CSS0046359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.7e-12 77.0 203 30.5
vmacro15090 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.3e-12 76.6 154 29.2
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 6.6e-12 75.1 145 35.2
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-11 73.6 170 29.4
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.9e-11 73.6 170 30.0
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.9e-11 73.6 170 30.0
Actinidia28480 Actinidia chinensis HOM05D000830 ORTHO05D003205 3.3e-11 72.8 79 41.8
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.3e-11 71.6 157 29.3
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.3e-11 71.6 157 29.3
Actinidia03349 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.1e-10 70.1 130 37.7
Rhsim02G0165900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.1e-10 70.1 46 78.3
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-10 69.7 157 28.0
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.6e-10 69.3 164 32.3
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.7e-10 68.9 154 31.8
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.1e-10 68.2 157 28.7
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 1.1e-09 67.8 167 28.1
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-09 67.8 168 29.2
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-09 67.0 140 30.7
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-09 67.0 142 31.0
Actinidia29943 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.3e-09 66.6 123 33.3
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-09 66.6 139 28.8
CSS0008534 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.1e-09 66.2 91 41.8
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.1e-09 66.2 142 31.0
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.8e-09 65.1 139 29.5
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.9e-09 64.7 142 31.0
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-08 63.5 142 29.6
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-08 63.2 139 28.8
Hma1.2p1_0046F.1_g026820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-08 62.8 139 28.1
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.8e-08 62.0 181 27.6
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.8e-08 62.0 142 29.6
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.6e-08 61.6 142 28.9
Actinidia34500 Actinidia chinensis HOM05D002514 ORTHO05D002761 4.9e-07 58.9 55 49.1
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 8.4e-07 58.2 165 25.5
Hma1.2p1_0863F.1_g230030 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-06 55.8 130 30.8
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 9.2e-06 54.7 77 37.7


User provided reference genes

Program Settings