Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-157 558.5 303 100.0
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-61 241.1 141 78.0
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.7e-60 236.5 399 38.3
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.0e-59 234.6 141 75.2
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.5e-58 229.9 141 73.8
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-55 220.7 141 71.6
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.4e-45 185.7 245 46.5
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 7.9e-44 181.8 141 58.9
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 1.8e-43 180.6 141 58.2
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 3.9e-43 179.5 141 58.2
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-41 174.1 123 70.7
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-41 173.7 276 40.9
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.1e-41 173.7 141 58.9
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-41 173.3 123 69.9
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-41 173.3 123 69.9
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-41 172.2 123 69.1
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 6.2e-41 172.2 141 55.3
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 8.4e-38 161.8 130 56.9
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.1e-37 158.7 139 49.6
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 6.0e-36 155.6 129 55.8
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.1e-35 152.5 139 48.9
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-34 151.4 145 49.7
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-32 144.8 139 47.5
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.3e-32 142.5 190 41.6
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 5.3e-32 142.5 144 49.3
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 6.9e-32 142.1 144 49.3
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.0e-32 141.7 138 46.4
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-31 141.4 144 49.3
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-30 137.9 144 47.9
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-30 137.1 96 68.8
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-30 137.1 108 57.4
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.5e-30 135.6 96 64.6
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-29 134.0 95 66.3
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.2e-29 132.9 94 66.0
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.5e-29 132.5 132 47.7
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 1.2e-28 131.3 108 54.6
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-28 130.2 92 64.1
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.6e-28 129.4 92 64.1
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-27 127.9 96 64.6
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.1e-27 125.9 92 62.0
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.1e-27 125.9 92 66.3
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-26 123.2 104 51.0
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.7e-26 121.7 114 50.9
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.8e-25 119.4 163 38.0
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 1.4e-24 117.9 81 59.3
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.1e-24 116.7 138 41.3
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.9e-24 115.5 70 70.0
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 2.9e-22 110.2 81 65.4
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 8.5e-22 108.6 140 41.4
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 2.5e-21 107.1 138 41.3
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-21 106.7 151 41.1
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.2e-21 106.3 83 53.0
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 7.2e-21 105.5 93 53.8
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.2e-21 105.5 83 53.0
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 9.4e-21 105.1 144 40.3
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-20 104.8 151 41.1
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-20 104.8 151 42.4
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 2.1e-20 104.0 146 39.7
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-20 104.0 151 40.4
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-20 103.6 148 41.2
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.1e-20 102.4 271 30.6
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-19 101.3 96 50.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-19 101.3 150 41.3
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-19 100.9 139 37.4
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 5.1e-19 99.4 146 41.1
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 8.8e-19 98.6 137 37.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-19 98.6 137 37.2
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.5e-18 97.8 73 54.8
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-18 97.4 142 41.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.9e-18 97.4 63 73.0
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 2.5e-18 97.1 132 37.9
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 2.5e-18 97.1 137 36.5
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 2.5e-18 97.1 137 37.2
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 4.3e-18 96.3 159 37.7
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 7.4e-18 95.5 137 36.5
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.7e-18 95.1 161 32.9
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 8.2e-17 92.0 132 36.4
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-16 91.7 73 52.1
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.4e-16 91.3 137 32.8
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-16 90.1 92 48.9
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-15 88.2 77 55.8
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 2.6e-15 87.0 66 53.0
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 3.4e-15 86.7 138 33.3
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-15 86.3 129 40.3
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 1.0e-14 85.1 281 32.7
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-14 84.7 114 42.1
PSO170G1977 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-14 83.6 147 36.7
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 1.1e-13 81.6 111 37.8
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 1.1e-13 81.6 127 32.3
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 5.5e-13 79.3 127 31.5
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.2e-13 79.0 74 54.1
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-13 79.0 125 34.4
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 1.0e-11 75.1 71 52.1
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.4e-11 74.7 116 35.3
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 6.7e-11 72.4 73 43.8
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 2.0e-10 70.9 112 33.9
COL.COLO4_34392 Corchorus olitorius HOM05D007230 ORTHO05D004756 4.4e-10 69.7 70 48.6
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-10 68.9 87 36.8
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 2.2e-09 67.4 107 33.6
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.7e-09 66.6 110 30.9
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-09 66.6 86 36.0
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.7e-09 66.6 110 30.9
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 3.7e-09 66.6 94 35.1
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 8.2e-09 65.5 110 30.9
Psat1g057080 Pisum sativum HOM05D007230 ORTHO05D004756 8.2e-09 65.5 56 48.2
MELO3C035463.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-08 65.1 82 39.0
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 1.8e-08 64.3 125 31.2
PSO675G0323 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-08 63.9 130 28.5
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 2.4e-08 63.9 142 28.2
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-08 63.2 128 29.7
Ciclev10010781m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.3e-08 62.8 103 32.0
COL.COLO4_03834 Corchorus olitorius HOM05D000002 ORTHO05D000047 5.3e-08 62.8 132 24.2
Hma1.2p1_0827F.1_g225000 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 7.0e-08 62.4 73 41.1
Ah.03g144900 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.1e-08 62.0 139 28.8
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-08 62.0 103 32.0
Sed0021481 Sechium edule HOM05D000002 ORTHO05D000001 9.1e-08 62.0 137 30.7
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.6 117 31.6
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 1.2e-07 61.6 125 29.6
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-07 61.6 35 80.0
AUR62032538 Chenopodium quinoa HOM05D000025 ORTHO05D000047 1.5e-07 61.2 132 25.0
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.0e-07 60.8 74 40.5
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-07 60.5 116 29.3
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-07 60.5 116 29.3
Sabra18G0086500 Salix brachista HOM05D007230 ORTHO05D004756 2.6e-07 60.5 44 59.1
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.4e-07 60.1 117 30.8
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-07 60.1 116 29.3
PGR083G0605 Punica granatum HOM05D000002 ORTHO05D000047 3.4e-07 60.1 136 32.4
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-07 59.7 117 30.8
PSO063G5787 Papaver somniferum HOM05D000002 ORTHO05D000047 4.5e-07 59.7 130 30.0
Sp5g18880 Schrenkiella parvula HOM05D000002 ORTHO05D000047 4.5e-07 59.7 126 29.4
Sp5g25877 Schrenkiella parvula HOM05D000002 ORTHO05D000047 4.5e-07 59.7 135 29.6
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-07 59.3 117 30.8
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-07 59.3 117 30.8
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-07 59.3 117 30.8
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-07 59.3 117 30.8
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-07 59.3 117 30.8
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-07 59.3 117 30.8
AUR62035786 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.9e-07 59.3 130 25.4
Ciclev10006515m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.9e-07 59.3 100 32.0
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 5.9e-07 59.3 76 43.4
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-07 58.9 146 28.8
Psat2g130280 Pisum sativum HOM05D001391 ORTHO05D000047 7.7e-07 58.9 130 24.6
AUR62035122 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.0e-06 58.5 132 22.7
Psat3g110120 Pisum sativum HOM05D000002 ORTHO05D000047 1.0e-06 58.5 117 28.2
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-06 58.2 146 27.4
THA.LOC104804236 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.3e-06 58.2 135 26.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 57.8 125 28.8
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-06 57.8 146 27.4
Psat6g204680 Pisum sativum HOM05D000002 ORTHO05D000047 1.7e-06 57.8 118 28.0
Hma1.2p1_0093F.1_g046970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-06 57.4 98 29.6
Psat2g125560 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-06 57.4 117 28.2
PGR044G2298 Punica granatum HOM05D000002 ORTHO05D000047 2.2e-06 57.4 135 28.1
Atru.chr2.1022 Acer truncatum HOM05D000002 ORTHO05D000047 2.9e-06 57.0 109 30.3
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
PGR004G1445 Punica granatum HOM05D000002 ORTHO05D000047 2.9e-06 57.0 135 28.9
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 57.0 81 34.6
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 57.0 117 29.9
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 5.0e-06 56.2 137 27.0
Psat5g071560 Pisum sativum HOM05D000002 ORTHO05D000047 5.0e-06 56.2 112 28.6
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-06 55.8 117 31.6
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-06 55.8 131 21.4
Ah.02g115850 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.5e-06 55.5 139 30.2
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 55.5 134 23.9
PGR142G0434 Punica granatum HOM05D000002 ORTHO05D000047 8.5e-06 55.5 138 31.9
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-06 55.5 131 22.1
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 8.5e-06 55.5 116 29.3


User provided reference genes

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