Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0045700 Rhododendron simsii HOM05D009860 ORTHO05D011999 6.7e-159 563.9 275 100.0
Rhsim02G0161900 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.3e-74 283.9 255 60.4
Rhsim12G0045300 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.7e-66 254.6 243 56.0
Rhsim01G0064500 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.1e-64 250.0 216 64.4
Rhsim12G0046200 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.9e-45 185.7 146 63.7
Rhsim12G0046100 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.9e-44 183.7 150 62.0
Rhsim12G0044900 Rhododendron simsii HOM05D009860 ORTHO05D011999 9.3e-44 181.4 149 62.4
vmacro01176 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 2.0e-38 163.7 246 43.5
Rhsim12G0044800 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.4e-37 158.3 162 52.5
vmacro01174 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 3.2e-36 156.4 238 42.0
Rhsim12G0044700 Rhododendron simsii HOM05D009860 ORTHO05D011999 7.2e-36 155.2 154 53.9
Rhsim05G0058700 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.3e-26 123.6 164 42.7
Rhsim05G0060100 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.8e-26 121.7 163 42.9
Rhsim12G0018800 Rhododendron simsii HOM05D009860 ORTHO05D011999 3.7e-24 116.3 308 31.8
Rhsim12G0045500 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.2e-22 111.3 72 73.6
Rhsim06G0033500 Rhododendron simsii HOM05D000862 ORTHO05D000943 2.0e-22 110.5 231 34.6
vmacro01173 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 5.0e-21 105.9 71 69.0
vmacro01171 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 1.0e-18 98.2 72 68.1
Rhsim12G0045400 Rhododendron simsii HOM05D009860 ORTHO05D011999 3.0e-18 96.7 77 61.0
vmacro21642 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 4.1e-15 86.3 82 48.8
Rhsim12G0045900 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.6e-14 84.3 70 60.0
Rhsim12G0019100 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.3e-13 81.3 71 54.9
Rhsim12G0019400 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.5e-12 77.8 70 55.7
Rhsim12G0019200 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.6e-11 74.3 70 52.9
vmacro21644 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 2.7e-11 73.6 76 50.0
Rhsim12G0019000 Rhododendron simsii HOM05D009860 ORTHO05D011999 3.6e-11 73.2 67 56.7
Dinv39638 Davidia involucrata HOM05D001418 ORTHO05D002038 4.7e-11 72.8 100 40.0
Dinv39635 Davidia involucrata HOM05D000862 ORTHO05D000943 8.0e-11 72.0 105 38.1
Rhsim12G0019300 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.0e-11 72.0 65 55.4
Dinv39633 Davidia involucrata HOM05D001418 ORTHO05D002038 4.0e-10 69.7 109 36.7
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 5.2e-10 69.3 235 28.1
Dinv39634 Davidia involucrata HOM05D001418 ORTHO05D002038 5.2e-10 69.3 99 38.4
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.8e-10 68.6 236 28.8
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.5e-09 67.8 73 52.1
Rhsim05G0059900 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.0e-09 67.4 68 50.0
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.7e-09 65.9 63 47.6
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-08 63.9 96 37.5
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.8e-08 63.5 249 28.5
TAR636G3094 Trochodendron aralioides HOM05D000101 ORTHO05D000089 2.8e-08 63.5 97 39.2
TAR371G0385 Trochodendron aralioides HOM05D000862 ORTHO05D000943 3.7e-08 63.2 76 48.7
Nitab4.5_0004186g0040 Nicotiana tabacum HOM05D000862 ORTHO05D000943 4.8e-08 62.8 88 37.5
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 6.3e-08 62.4 67 40.3
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 6.3e-08 62.4 151 29.8
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 8.2e-08 62.0 108 33.3
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 1.1e-07 61.6 108 32.4
Nitab4.5_0002616g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.4e-07 61.2 76 42.1
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.4e-07 61.2 59 47.5
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.4e-07 61.2 74 41.9
Lsat_1_v5_gn_8_43360 Lactuca sativa HOM05D009860 ORTHO05D011999 2.4e-07 60.5 61 47.5
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.4e-07 60.5 75 42.7
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 5.3e-07 59.3 80 38.8
Nitab4.5_0000326g0380 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.3e-07 59.3 100 36.0
Nitab4.5_0002224g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.3e-07 59.3 72 38.9
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 7.0e-07 58.9 59 47.5
Nitab4.5_0001740g0110 Nicotiana tabacum HOM05D000862 ORTHO05D000943 9.1e-07 58.5 75 42.7
Nitab4.5_0002977g0130 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.6e-06 57.8 75 40.0
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.6e-06 57.8 79 40.5
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 1.6e-06 57.8 75 40.0
Nitab4.5_0002616g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.0e-06 57.4 75 40.0
Nitab4.5_0010841g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.0e-06 57.4 100 35.0
Nitab4.5_0000295g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.7e-06 57.0 55 47.3
Peaxi162Scf00417g01349 Petunia axillaris HOM05D000862 ORTHO05D000943 3.5e-06 56.6 54 50.0
Lju427C3G7 Lonicera japonica HOM05D000862 ORTHO05D000943 4.5e-06 56.2 202 31.2
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 7.7e-06 55.5 245 29.8
Nitab4.5_0005485g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.7e-06 55.5 60 46.7
TWI14G0123 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 7.7e-06 55.5 204 29.9


User provided reference genes

Program Settings