Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0044900 Rhododendron simsii HOM05D009860 ORTHO05D011999 5.1e-116 421.0 201 100.0
Rhsim12G0045300 Rhododendron simsii HOM05D009860 ORTHO05D011999 6.2e-45 184.9 147 62.6
Rhsim12G0045700 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.0e-45 184.5 149 62.4
Rhsim02G0161900 Rhododendron simsii HOM05D009860 ORTHO05D011999 5.8e-43 178.3 144 62.5
Rhsim01G0064500 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.6e-40 170.2 173 53.8
Rhsim12G0046200 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.2e-37 160.6 176 49.4
Rhsim12G0046100 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.2e-35 154.1 147 53.7
Rhsim12G0044700 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.1e-32 143.3 148 53.4
Rhsim12G0044800 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.6e-32 142.1 145 55.2
Rhsim05G0058700 Rhododendron simsii HOM05D009860 ORTHO05D011999 8.9e-28 127.9 159 42.8
vmacro01176 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 7.6e-27 124.8 243 32.9
Rhsim05G0060100 Rhododendron simsii HOM05D009860 ORTHO05D011999 9.9e-27 124.4 159 41.5
vmacro01174 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 1.2e-24 117.5 250 33.2
Rhsim12G0045500 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.7e-21 105.5 70 71.4
vmacro01173 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 3.1e-20 102.8 67 71.6
Rhsim06G0033500 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.9e-17 93.6 233 28.3
Rhsim12G0018800 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.6e-16 89.0 70 61.4
Rhsim12G0045400 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.3e-14 82.4 60 63.3
Rhsim12G0019200 Rhododendron simsii HOM05D009860 ORTHO05D011999 9.6e-14 81.3 71 56.3
Rhsim12G0019100 Rhododendron simsii HOM05D009860 ORTHO05D011999 1.3e-13 80.9 70 54.3
Rhsim12G0045900 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.1e-13 80.1 62 62.9
vmacro01171 Vaccinium macrocarpon HOM05D009860 ORTHO05D011999 3.6e-13 79.3 64 57.8
Rhsim12G0019400 Rhododendron simsii HOM05D009860 ORTHO05D011999 4.8e-13 79.0 71 54.9
Rhsim12G0019300 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.4e-12 76.6 70 52.9
Rhsim05G0059900 Rhododendron simsii HOM05D009860 ORTHO05D011999 3.1e-12 76.3 257 26.1
vmacro21642 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 6.9e-12 75.1 67 49.3
Rhsim12G0019000 Rhododendron simsii HOM05D009860 ORTHO05D011999 2.0e-11 73.6 74 45.9
QL07p019673 Quercus lobata HOM05D000862 ORTHO05D000943 6.4e-10 68.6 73 47.9
Dinv39638 Davidia involucrata HOM05D001418 ORTHO05D002038 1.2e-08 64.3 66 51.5
Dinv39634 Davidia involucrata HOM05D001418 ORTHO05D002038 6.0e-08 62.0 65 49.2
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 7.9e-08 61.6 78 42.3
TAR636G3094 Trochodendron aralioides HOM05D000101 ORTHO05D000089 7.9e-08 61.6 64 48.4
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.0e-07 61.2 63 47.6
Nitab4.5_0004186g0040 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.3e-07 60.8 59 45.8
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.3e-07 60.1 79 39.2
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 3.9e-07 59.3 59 45.8
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 5.1e-07 58.9 120 30.8
Dinv39633 Davidia involucrata HOM05D001418 ORTHO05D002038 6.7e-07 58.5 60 50.0
Nitab4.5_0002224g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 6.7e-07 58.5 64 45.3
Dinv39635 Davidia involucrata HOM05D000862 ORTHO05D000943 8.7e-07 58.2 69 44.9
TAR371G0385 Trochodendron aralioides HOM05D000862 ORTHO05D000943 8.7e-07 58.2 67 47.8
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.1e-06 57.8 63 44.4
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.5e-06 57.4 79 38.0
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 1.9e-06 57.0 120 30.0
Lsat_1_v5_gn_8_43360 Lactuca sativa HOM05D009860 ORTHO05D011999 2.5e-06 56.6 61 45.9
Nitab4.5_0002616g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.5e-06 56.6 63 44.4
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.5e-06 56.6 63 44.4
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.3e-06 56.2 63 44.4
TAR365G1237 Trochodendron aralioides HOM05D000101 ORTHO05D000089 4.3e-06 55.8 61 37.7
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 5.6e-06 55.5 75 42.7
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 5.6e-06 55.5 59 45.8
Peaxi162Scf00417g01349 Petunia axillaris HOM05D000862 ORTHO05D000943 7.4e-06 55.1 54 51.9


User provided reference genes

Program Settings