Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 8.2e-46 186.8 102 100.0
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 7.7e-36 153.7 95 85.3
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 2.2e-35 152.1 101 82.2
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.7e-33 145.2 99 81.8
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.7e-33 145.2 102 78.4
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 6.8e-32 140.6 100 78.0
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 1.5e-31 139.4 97 79.4
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 1.5e-31 139.4 96 80.2
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 4.4e-31 137.9 100 77.0
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 5.7e-31 137.5 97 78.4
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 1.7e-30 136.0 101 73.3
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 1.7e-30 136.0 99 73.7
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 3.7e-30 134.8 100 74.0
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 3.7e-30 134.8 100 77.0
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 1.8e-29 132.5 97 77.3
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 1.8e-29 132.5 94 75.5
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 2.4e-29 132.1 98 76.5
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 5.4e-29 131.0 85 82.4
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 7.0e-29 130.6 97 70.1
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 7.0e-29 130.6 112 67.9
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 7.0e-29 130.6 96 76.0
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 9.1e-29 130.2 99 73.7
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 9.1e-29 130.2 99 73.7
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 1.2e-28 129.8 100 72.0
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 1.6e-28 129.4 91 75.8
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 5.9e-28 127.5 86 80.2
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 7.7e-28 127.1 97 74.2
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 7.7e-28 127.1 78 88.5
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 7.7e-28 127.1 80 85.0
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 1.7e-27 125.9 80 82.5
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 2.9e-27 125.2 80 83.8
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 5.0e-27 124.4 98 72.4
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 5.0e-27 124.4 95 68.4
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 5.0e-27 124.4 99 73.7
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 6.5e-27 124.0 98 66.3
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 8.6e-27 123.6 98 67.3
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 8.6e-27 123.6 98 67.3
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 1.1e-26 123.2 78 84.6
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 2.5e-26 122.1 94 72.3
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 3.3e-26 121.7 78 82.1
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 4.2e-26 121.3 78 84.6
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 4.2e-26 121.3 100 74.0
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 4.2e-26 121.3 79 78.5
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 7.2e-26 120.6 83 78.3
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 9.5e-26 120.2 78 85.9
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 1.2e-25 119.8 85 76.5
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 1.6e-25 119.4 80 82.5
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 2.1e-25 119.0 101 68.3
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 2.1e-25 119.0 100 69.0
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 2.8e-25 118.6 99 68.7
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 3.6e-25 118.2 78 85.9
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 3.6e-25 118.2 78 84.6
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 4.7e-25 117.9 104 66.3
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 6.1e-25 117.5 80 75.0
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 6.1e-25 117.5 99 64.6
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 6.1e-25 117.5 96 71.9
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 8.0e-25 117.1 78 80.8
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.0e-24 116.7 76 85.5
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.0e-24 116.7 76 85.5
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 1.0e-24 116.7 80 78.8
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 1.0e-24 116.7 78 80.8
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 1.8e-24 115.9 79 81.0
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 1.8e-24 115.9 98 67.3
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 1.8e-24 115.9 78 80.8
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 2.3e-24 115.5 76 84.2
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 3.0e-24 115.2 80 77.5
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 4.0e-24 114.8 88 72.7
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 5.2e-24 114.4 80 76.2
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 6.8e-24 114.0 97 67.0
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 6.8e-24 114.0 80 78.8
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 6.8e-24 114.0 80 78.8
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 6.8e-24 114.0 85 72.9
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 2.0e-23 112.5 78 76.9
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 2.6e-23 112.1 80 80.0
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 2.6e-23 112.1 80 78.8
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 4.4e-23 111.3 99 63.6
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 4.4e-23 111.3 85 71.8
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 5.7e-23 110.9 97 64.9
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 5.7e-23 110.9 79 78.5
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 5.7e-23 110.9 80 72.5
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 7.5e-23 110.5 97 64.9
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 7.5e-23 110.5 80 76.2
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 7.5e-23 110.5 80 76.2
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 7.5e-23 110.5 90 66.7
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.8e-23 110.2 85 71.8
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.8e-23 110.2 85 71.8
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.8e-23 110.2 85 71.8
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.8e-23 110.2 85 71.8
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.8e-23 110.2 85 71.8
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 1.3e-22 109.8 85 71.8
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 1.7e-22 109.4 85 71.8
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 1.7e-22 109.4 85 70.6
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 1.7e-22 109.4 85 71.8
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.7e-22 109.4 101 63.4
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 1.7e-22 109.4 80 73.8
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.8e-22 108.6 82 73.2
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.8e-22 108.6 82 73.2
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 65.3
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 65.3
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 65.3
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 65.3
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 65.3
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 4.9e-22 107.8 82 68.3
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 4.9e-22 107.8 98 64.3
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 6.3e-22 107.5 80 76.2
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 6.3e-22 107.5 75 80.0
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 8.3e-22 107.1 88 68.2
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 8.3e-22 107.1 82 68.3
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 8.3e-22 107.1 80 75.0
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 8.3e-22 107.1 97 63.9
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 1.1e-21 106.7 84 70.2
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 1.1e-21 106.7 80 75.0
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 1.1e-21 106.7 81 70.4
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 1.1e-21 106.7 88 68.2
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 2.4e-21 105.5 85 68.2
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 2.4e-21 105.5 93 66.7
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 3.1e-21 105.1 85 68.2
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 3.1e-21 105.1 80 71.2
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 3.1e-21 105.1 80 72.5
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 5.4e-21 104.4 91 63.7
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 9.2e-21 103.6 98 63.3
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 2.0e-20 102.4 78 67.9
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 4.5e-20 101.3 80 70.0
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 4.5e-20 101.3 80 70.0
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 1.3e-19 99.8 97 61.9
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 2.3e-19 99.0 106 56.6
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 8.6e-19 97.1 79 69.6
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 1.5e-18 96.3 90 58.9
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 4.3e-18 94.7 79 68.4
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 1.2e-17 93.2 78 66.7
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 1.2e-17 93.2 78 66.7
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 2.1e-17 92.4 95 54.7
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 8.0e-17 90.5 93 61.3
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.8e-16 89.4 97 59.8
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 5.2e-16 87.8 82 62.2
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 3.5e-12 75.1 91 52.7
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 4.3e-10 68.2 53 73.6
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 2.8e-09 65.5 57 66.7
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 6.8e-08 60.8 57 61.4
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 6.8e-08 60.8 61 55.7
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.7e-06 55.1 44 70.5
Ciclev10006727m.g Citrus clementina HOM05D005452 ORTHO05D006618 4.9e-06 54.7 41 75.6


User provided reference genes

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