Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0030600 Rhododendron simsii HOM05D003830 ORTHO05D004446 2.8e-163 578.6 292 100.0
vmacro01085 Vaccinium macrocarpon HOM05D003830 ORTHO05D004446 7.1e-50 201.8 446 37.7
Rhsim12G0030500 Rhododendron simsii HOM05D003830 ORTHO05D004446 1.5e-47 194.1 446 37.0
Rhsim12G0031400 Rhododendron simsii HOM05D003830 ORTHO05D004446 4.3e-47 192.6 446 37.0
CSS0000134 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 2.1e-33 147.1 214 50.9
Dinv14800 Davidia involucrata HOM05D003830 ORTHO05D004446 2.6e-28 130.2 214 43.9
Actinidia33257 Actinidia chinensis HOM05D003830 ORTHO05D004446 5.5e-26 122.5 214 44.9
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 9.3e-26 121.7 214 44.4
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 2.6e-20 103.6 208 40.9
Dinv10992 Davidia involucrata HOM05D003830 ORTHO05D004446 1.6e-17 94.4 185 42.2
CSS0032396 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 3.7e-14 83.2 183 39.9
Actinidia30673 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.1e-13 81.6 175 42.3
GSVIVG01010345001 Vitis vinifera HOM05D003830 ORTHO05D004446 7.6e-12 75.5 208 35.1
Cc11_g16600 Coffea canephora HOM05D003830 ORTHO05D004446 3.8e-11 73.2 190 38.4
Actinidia30674 Actinidia chinensis HOM05D003830 ORTHO05D004446 6.5e-11 72.4 69 56.5
DCAR_013711 Daucus carota HOM05D003830 ORTHO05D004446 1.9e-10 70.9 203 36.9
Manes.13G015800 Manihot esculenta HOM05D003830 ORTHO05D004446 5.5e-10 69.3 218 33.5
Prupe.1G233200 Prunus persica HOM05D003830 ORTHO05D004446 5.5e-10 69.3 278 28.8
DCAR_007014 Daucus carota HOM05D003830 ORTHO05D004446 7.2e-10 68.9 252 33.7
DCAR_024085 Daucus carota HOM05D003830 ORTHO05D004446 2.1e-09 67.4 204 35.3
QL03p054734 Quercus lobata HOM05D003830 ORTHO05D004446 1.0e-08 65.1 220 32.3
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 1.8e-08 64.3 202 31.2
Hma1.2p1_1340F.1_g276750 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 5.1e-08 62.8 253 32.4
TAR622G0818 Trochodendron aralioides HOM05D003830 ORTHO05D004446 5.1e-08 62.8 223 33.2
TAR629G0808 Trochodendron aralioides HOM05D003830 ORTHO05D004446 6.7e-08 62.4 281 28.5
Manes.12G014700 Manihot esculenta HOM05D003830 ORTHO05D004446 8.7e-08 62.0 201 33.3
Nn3g16538 Nelumbo nucifera HOM05D003830 ORTHO05D004446 4.3e-07 59.7 183 34.4
AUR62005571 Chenopodium quinoa HOM05D003830 ORTHO05D004446 2.8e-06 57.0 132 37.1
Hund06065 Selenicereus undatus HOM05D003830 ORTHO05D004446 2.8e-06 57.0 266 30.8
CiPaw.05G115100 Carya illinoinensis HOM05D003830 ORTHO05D004446 3.7e-06 56.6 224 33.5
Potri.008G178600 Populus trichocarpa HOM05D003830 ORTHO05D004446 4.8e-06 56.2 221 29.4
Oeu041685.1 Olea europaea HOM05D003830 ORTHO05D004446 6.3e-06 55.8 184 33.2
TAR374G0580 Trochodendron aralioides HOM05D003830 ORTHO05D004446 8.2e-06 55.5 267 27.7


User provided reference genes

Program Settings