Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 6.7e-82 307.4 163 100.0
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 2.2e-37 159.5 112 74.1
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.9e-36 156.4 122 68.9
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 3.4e-33 145.6 126 65.1
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 5.7e-33 144.8 125 61.6
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 2.2e-32 142.9 129 59.7
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 2.2e-32 142.9 129 59.7
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 4.8e-32 141.7 118 63.6
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 6.3e-32 141.4 129 58.9
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 4.1e-31 138.7 116 62.9
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 4.1e-31 138.7 126 61.9
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 9.1e-31 137.5 121 60.3
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.2e-30 137.1 118 66.1
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 2.0e-30 136.3 126 61.9
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 2.7e-30 136.0 118 59.3
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 2.7e-30 136.0 125 63.2
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 3.5e-30 135.6 125 59.2
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 4.5e-30 135.2 118 61.0
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 1.7e-29 133.3 123 58.5
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 2.3e-29 132.9 118 61.0
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.3e-29 132.9 118 60.2
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 2.3e-29 132.9 118 60.2
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 2.3e-29 132.9 125 57.6
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 2.9e-29 132.5 125 58.4
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 2.9e-29 132.5 123 58.5
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 2.9e-29 132.5 130 57.7
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 3.8e-29 132.1 124 58.9
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 3.8e-29 132.1 119 60.5
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 5.0e-29 131.7 118 60.2
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 6.6e-29 131.3 109 64.2
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 8.6e-29 131.0 126 59.5
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.1e-28 130.6 119 61.3
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 1.1e-28 130.6 127 57.5
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 1.5e-28 130.2 126 57.1
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 1.9e-28 129.8 119 62.2
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 3.3e-28 129.0 130 53.1
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 3.3e-28 129.0 125 57.6
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 7.2e-28 127.9 121 60.3
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 9.5e-28 127.5 128 57.8
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 1.2e-27 127.1 107 62.6
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 2.8e-27 125.9 125 56.8
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 3.6e-27 125.6 116 55.2
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 3.6e-27 125.6 126 57.1
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 6.1e-27 124.8 121 57.9
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 6.1e-27 124.8 100 65.0
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 1.4e-26 123.6 113 60.2
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 1.8e-26 123.2 104 63.5
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 4.0e-26 122.1 113 59.3
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 4.0e-26 122.1 107 63.6
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 5.2e-26 121.7 120 55.0
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 6.8e-26 121.3 121 56.2
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 6.8e-26 121.3 116 55.2
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 6.8e-26 121.3 120 59.2
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 8.9e-26 120.9 128 54.7
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 8.9e-26 120.9 104 59.6
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 1.2e-25 120.6 124 56.5
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 1.5e-25 120.2 102 59.8
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 1.5e-25 120.2 113 56.6
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 1.5e-25 120.2 113 56.6
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 1.5e-25 120.2 120 54.2
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 2.0e-25 119.8 121 55.4
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 2.6e-25 119.4 102 62.7
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 3.4e-25 119.0 91 64.8
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 3.4e-25 119.0 113 61.1
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 5.7e-25 118.2 116 51.7
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 5.7e-25 118.2 132 52.3
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 7.5e-25 117.9 115 55.7
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 7.5e-25 117.9 132 52.3
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 9.8e-25 117.5 91 64.8
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 9.8e-25 117.5 103 59.2
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 1.3e-24 117.1 125 54.4
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 1.3e-24 117.1 125 54.4
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 1.3e-24 117.1 116 57.8
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 2.2e-24 116.3 132 52.3
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 2.2e-24 116.3 108 59.3
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 2.8e-24 115.9 104 59.6
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 2.8e-24 115.9 104 59.6
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 3.7e-24 115.5 97 57.7
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 6.3e-24 114.8 118 54.2
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 6.3e-24 114.8 125 53.6
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 1.1e-23 114.0 123 55.3
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.4e-23 113.6 125 52.8
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 1.8e-23 113.2 95 61.1
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 9.2e-23 110.9 97 56.7
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 9.2e-23 110.9 113 53.1
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 1.2e-22 110.5 122 54.9
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 1.6e-22 110.2 110 54.5
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 2.0e-22 109.8 97 58.8
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 2.0e-22 109.8 111 55.9
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 2.7e-22 109.4 98 59.2
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 3.5e-22 109.0 116 54.3
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 4.5e-22 108.6 111 55.9
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 1.1e-20 104.0 98 58.2
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 2.5e-20 102.8 97 58.8
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 6.1e-19 98.2 96 54.2
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 6.4e-16 88.2 109 45.9
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 4.6e-14 82.0 130 40.8
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 3.6e-11 72.4 87 42.5
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 7.5e-09 64.7 51 64.7
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 7.1e-07 58.2 83 39.8
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 4.6e-06 55.5 98 34.7
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 4.6e-06 55.5 98 34.7


User provided reference genes

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