Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 4.6e-115 417.9 213 100.0
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 2.9e-37 159.5 224 45.5
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 1.9e-28 130.2 159 45.9
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 3.3e-28 129.4 214 40.2
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 4.0e-26 122.5 222 35.6
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 6.8e-26 121.7 226 38.1
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 1.5e-25 120.6 228 37.3
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 9.8e-25 117.9 201 38.8
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 1.3e-24 117.5 222 36.5
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 2.4e-23 113.2 220 35.5
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 1.6e-22 110.5 197 38.1
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 3.0e-21 106.3 211 36.0
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.1e-20 104.4 220 38.2
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 1.5e-20 104.0 179 38.0
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 1.5e-20 104.0 203 36.0
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.9e-20 103.6 158 39.9
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.9e-20 103.6 220 35.0
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 3.3e-20 102.8 120 48.3
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 3.3e-20 102.8 208 35.6
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 4.3e-20 102.4 195 35.4
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 4.3e-20 102.4 163 40.5
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 5.6e-20 102.1 166 36.7
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 5.6e-20 102.1 201 33.3
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 7.3e-20 101.7 193 35.8
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.2e-19 100.9 186 36.0
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 1.2e-19 100.9 195 34.9
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 1.6e-19 100.5 216 32.9
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 2.1e-19 100.1 228 34.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 2.8e-19 99.8 98 56.1
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.8e-19 99.8 158 39.2
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 2.8e-19 99.8 148 39.2
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 3.6e-19 99.4 207 35.7
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 4.7e-19 99.0 206 33.5
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 6.2e-19 98.6 101 47.5
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 6.2e-19 98.6 215 33.0
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 6.2e-19 98.6 209 37.3
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.0e-18 97.8 219 35.6
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.0e-18 97.8 148 38.5
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 2.3e-18 96.7 151 38.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 3.1e-18 96.3 205 34.1
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 4.0e-18 95.9 192 37.0
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 4.0e-18 95.9 143 39.9
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 5.2e-18 95.5 207 33.8
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 6.8e-18 95.1 187 37.4
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.2e-17 94.4 198 33.3
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.5e-17 94.0 111 44.1
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 2.0e-17 93.6 96 46.9
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 2.0e-17 93.6 171 36.8
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 2.6e-17 93.2 202 36.6
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 2.6e-17 93.2 149 36.2
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 4.4e-17 92.4 137 43.1
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 4.4e-17 92.4 218 33.5
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 5.8e-17 92.0 198 32.8
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 7.5e-17 91.7 145 40.0
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.3e-16 90.9 209 31.6
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 1.3e-16 90.9 162 38.3
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 2.2e-16 90.1 219 31.5
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.9e-16 89.7 162 39.5
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 4.9e-16 89.0 209 35.9
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 6.4e-16 88.6 163 38.0
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 6.4e-16 88.6 202 33.2
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 8.3e-16 88.2 195 33.3
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 8.3e-16 88.2 209 32.1
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 1.1e-15 87.8 172 37.2
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 3.2e-15 86.3 215 34.0
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 3.2e-15 86.3 135 40.0
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 7.0e-15 85.1 108 46.3
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 7.0e-15 85.1 108 46.3
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 9.2e-15 84.7 216 32.9
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 9.2e-15 84.7 162 37.7
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 9.2e-15 84.7 205 33.2
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 1.6e-14 84.0 166 33.7
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 2.0e-14 83.6 139 36.0
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.5e-14 82.8 162 38.9
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 7.8e-14 81.6 163 33.1
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 3.0e-13 79.7 204 30.4
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 3.9e-13 79.3 186 31.2
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 8.6e-13 78.2 209 32.5
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.1e-12 77.8 101 40.6
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 1.9e-12 77.0 193 32.6
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 2.5e-12 76.6 170 32.4
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 2.5e-12 76.6 186 28.0
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 2.5e-12 76.6 97 45.4
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.5e-12 76.6 96 42.7
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 3.3e-12 76.3 143 35.7
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 3.3e-12 76.3 215 29.3
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 5.6e-12 75.5 189 28.0
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 9.5e-12 74.7 114 42.1
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 1.2e-11 74.3 173 31.2
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 1.2e-11 74.3 83 41.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.2e-11 74.3 195 32.8
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 1.6e-11 73.9 173 31.2
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 2.8e-11 73.2 186 27.4
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.8e-11 73.2 96 42.7
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 2.8e-11 73.2 81 42.0
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 8.1e-11 71.6 186 28.5
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 8.1e-11 71.6 186 28.5
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 8.1e-11 71.6 113 37.2
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 1.4e-10 70.9 81 38.3
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.8e-10 70.5 200 28.5
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 2.3e-10 70.1 171 30.4
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 4.0e-10 69.3 83 34.9
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 6.8e-10 68.6 97 34.0
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 2.0e-09 67.0 108 36.1
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 3.4e-09 66.2 169 27.2
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 3.7e-08 62.8 74 39.2
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.9e-07 60.5 168 28.6
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 4.1e-07 59.3 62 41.9
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 7.1e-07 58.5 168 28.0
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 9.2e-07 58.2 170 29.4


User provided reference genes

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