Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0022600 Rhododendron simsii HOM05D004072 ORTHO05D005933 0.0e+00 1098.6 544 100.0
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 4.7e-07 60.5 103 40.8
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 6.2e-07 60.1 49 67.3
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 6.2e-07 60.1 49 67.3
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.1e-06 59.3 49 65.3
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.1e-06 59.3 49 65.3
QL05p053334 Quercus lobata HOM05D004072 ORTHO05D005933 1.1e-06 59.3 49 65.3
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-06 59.3 29 93.1
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.1e-06 59.3 49 65.3
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 1.4e-06 58.9 49 65.3
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.8e-06 58.5 49 65.3
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.8e-06 58.5 49 65.3
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 2.4e-06 58.2 49 63.3
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 2.4e-06 58.2 49 63.3
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 65.3
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
HanXRQChr03g0090711 Helianthus annuus HOM05D001192 ORTHO05D010160 3.1e-06 57.8 143 26.6
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 63.3
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 61.2
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 65.3
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 65.3
PGSC0003DMG400021174 Solanum tuberosum HOM05D004072 ORTHO05D005933 3.1e-06 57.8 49 65.3
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 4.0e-06 57.4 49 63.3
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 5.2e-06 57.0 49 65.3
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 5.2e-06 57.0 49 63.3
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 5.2e-06 57.0 49 63.3
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 6.8e-06 56.6 49 63.3
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 6.8e-06 56.6 49 61.2
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 6.8e-06 56.6 49 59.2
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 63.3
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 8.9e-06 56.2 49 61.2


User provided reference genes

Program Settings