Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.9e-115 417.9 229 100.0
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.1e-82 310.5 259 68.0
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 5.0e-67 258.5 234 61.1
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.7e-62 243.4 232 60.3
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.7e-62 243.4 285 52.6
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.7e-59 233.4 249 55.0
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 5.5e-58 228.4 213 60.6
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 8.0e-57 224.6 247 53.8
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.2e-54 216.5 234 54.3
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 1.1e-53 214.2 232 54.3
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.3e-51 207.2 235 53.2
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.2e-50 201.4 236 52.5
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.1e-49 199.9 235 51.9
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 4.7e-49 198.7 236 50.4
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 2.3e-48 196.4 230 50.0
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 6.8e-48 194.9 235 49.8
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 1.2e-47 194.1 230 49.6
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 3.4e-47 192.6 233 49.4
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 9.8e-47 191.0 234 49.1
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 4.9e-46 188.7 234 48.7
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 8.3e-46 188.0 215 51.2
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.1e-45 187.6 221 52.0
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 3.5e-44 182.6 237 46.4
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.9e-43 179.1 169 62.7
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 8.6e-43 177.9 222 51.4
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 8.6e-43 177.9 282 44.0
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.9e-42 176.8 235 47.2
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.8e-41 172.9 255 46.7
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 3.6e-41 172.6 216 50.5
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 4.7e-41 172.2 244 45.9
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 4.0e-40 169.1 236 45.3
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 8.9e-40 167.9 223 45.7
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 1.3e-38 164.1 194 49.5
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 1.3e-38 164.1 235 45.1
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 1.7e-38 163.7 235 44.7
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 1.4e-37 160.6 217 44.2
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 1.6e-36 157.1 216 46.8
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 4.6e-36 155.6 243 45.3
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 6.0e-36 155.2 218 45.0
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 7.8e-36 154.8 249 43.4
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.0e-35 152.9 243 48.1
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 5.0e-35 152.1 234 43.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 8.6e-35 151.4 221 43.9
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 8.6e-35 151.4 231 43.3
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.1e-34 151.0 207 47.3
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.9e-34 150.2 253 44.3
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.6e-33 147.1 246 42.7
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 2.1e-33 146.7 207 46.9
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 2.1e-33 146.7 223 45.3
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.8e-33 146.4 195 50.3
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.8e-33 146.4 232 41.8
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 3.6e-33 146.0 241 44.4
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.0e-33 144.8 213 41.8
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 3.1e-32 142.9 220 44.1
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 5.2e-32 142.1 233 41.6
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 6.8e-32 141.7 235 43.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 6.8e-32 141.7 221 42.5
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.2e-31 141.0 233 41.6
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.0e-31 140.2 224 43.3
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.6e-31 139.8 240 42.9
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 2.2e-30 136.7 199 49.2
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.9e-30 136.3 224 42.9
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 2.9e-30 136.3 244 39.3
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.9e-30 135.6 193 44.6
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 6.4e-30 135.2 229 41.5
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.9e-29 133.7 232 40.5
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.2e-29 132.9 229 40.6
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.2e-29 132.9 229 40.6
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 3.2e-29 132.9 214 43.0
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 4.1e-29 132.5 204 50.0
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 6.0e-28 128.6 224 41.1
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 6.0e-28 128.6 218 40.4
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 7.8e-28 128.3 204 47.5
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.3e-27 127.5 210 40.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.1e-27 125.6 158 45.6
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.5e-26 124.0 234 38.5
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.3e-26 121.7 210 41.0
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.6e-25 119.4 223 39.0
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.8e-24 117.1 198 43.9
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 6.8e-24 115.2 223 38.1
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.0e-23 113.6 238 34.0
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.9e-22 109.8 220 40.5
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 6.4e-22 108.6 246 35.4
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 6.4e-22 108.6 242 34.7
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 1.1e-21 107.8 149 46.3
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 5.4e-21 105.5 226 35.4
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.7e-20 103.2 187 37.4
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 7.8e-20 101.7 182 41.8
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 5.1e-19 99.0 148 42.6
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 6.6e-19 98.6 148 42.6
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 8.6e-19 98.2 205 38.0
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.1e-18 97.8 245 32.7
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.1e-18 97.8 245 32.2
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 1.1e-18 97.8 206 37.4
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.9e-18 97.1 188 37.2
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.5e-18 96.7 205 37.6
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 2.5e-18 96.7 205 37.6
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 3.3e-18 96.3 237 35.4
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 9.6e-18 94.7 205 37.1
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 9.6e-18 94.7 213 34.7
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 2.8e-17 93.2 206 35.9
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.2e-17 92.0 237 35.0
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 8.1e-17 91.7 152 40.8
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.1e-16 91.3 80 56.2
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 3.1e-16 89.7 237 31.6
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 3.1e-16 89.7 223 35.4
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.6e-15 86.7 216 37.0
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 3.4e-15 86.3 112 43.8
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 3.4e-15 86.3 233 32.2
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 4.4e-15 85.9 231 33.8
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 7.6e-15 85.1 223 35.9
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 1.7e-14 84.0 235 34.0
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 2.2e-14 83.6 154 37.0
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.2e-13 79.7 89 48.3
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 2.7e-12 76.6 201 32.8
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 7.8e-12 75.1 132 38.6
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 3.0e-11 73.2 208 32.7
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 5.1e-11 72.4 62 54.8
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.6e-09 66.2 173 36.4
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.2e-09 65.5 173 36.4
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 1.2e-07 61.2 244 31.1
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.6e-07 60.1 172 31.4
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.4e-07 59.3 151 37.1
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 9.9e-07 58.2 43 60.5
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 4.9e-06 55.8 182 33.0


User provided reference genes

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