Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.2e-167 591.7 292 100.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.0e-96 355.1 451 45.9
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.5e-89 332.0 321 55.1
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-75 287.0 350 47.1
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-74 284.3 335 49.3
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.7e-67 259.2 398 39.4
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.8e-61 238.4 327 43.1
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.2e-58 229.6 370 38.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.3e-51 207.6 128 76.6
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.4e-51 204.9 209 55.0
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.5e-44 184.1 124 71.8
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-42 177.9 198 51.0
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 9.6e-39 164.9 108 74.1
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-30 137.5 416 28.6
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-25 120.9 349 27.2
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.5e-23 114.4 240 32.1
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-23 112.8 344 28.8
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-22 111.3 415 25.1
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.2e-22 109.0 153 38.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-21 108.2 128 41.4
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-21 107.1 125 46.4
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.1e-21 106.7 326 27.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.4e-20 103.2 249 29.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-20 102.8 128 39.1
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.8e-20 102.4 242 29.8
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-19 101.7 247 29.6
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.3e-19 101.3 243 29.2
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-19 100.5 235 30.2
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.5e-19 99.0 137 38.7
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.5e-19 99.0 137 38.7
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-18 97.8 131 40.5
Rhsim02G0101300 Rhododendron simsii HOM05D000003 ORTHO05D000001 1.2e-17 94.7 85 56.5
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.6e-17 92.8 160 35.6
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.9e-17 92.0 233 30.0
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-16 91.3 294 27.9
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 8.7e-16 88.6 116 39.7
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 8.7e-16 88.6 108 42.6
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-15 86.7 276 27.5
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-14 84.3 128 36.7
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.8e-14 83.6 255 27.1
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 3.7e-14 83.2 130 37.7
CSS0006002 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-14 82.4 271 25.8
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.3e-14 82.4 97 42.3
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.2e-14 82.0 257 30.0
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.4e-13 81.3 267 28.5
Actinidia31222 Actinidia chinensis HOM05D000003 ORTHO05D000006 3.1e-13 80.1 237 28.7
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 9.0e-13 78.6 88 43.2
vmacro19083 Vaccinium macrocarpon HOM05D000458 ORTHO05D000951 2.0e-12 77.4 238 26.5
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-11 75.1 128 35.2
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-11 74.7 125 33.6
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 2.2e-11 73.9 124 29.0
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.9e-11 73.6 133 34.6
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 2.9e-11 73.6 232 27.2
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 3.8e-11 73.2 402 22.4
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.5e-11 72.4 103 38.8
CSS0048899 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.5e-11 72.4 125 35.2
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-10 71.2 117 33.3
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-10 71.2 100 40.0
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-10 70.5 122 33.6
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 4.2e-10 69.7 96 38.5
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 4.2e-10 69.7 132 34.1
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 4.2e-10 69.7 113 37.2
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 5.5e-10 69.3 403 23.8
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 9.3e-10 68.6 134 31.3
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.2e-09 68.2 93 37.6
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.6e-09 67.8 96 37.5
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-09 67.4 118 33.1
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 3.6e-09 66.6 118 35.6
Rhsim05G0174000 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.9e-09 65.5 177 28.2
COL.COLO4_14554 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.3e-08 64.7 252 25.0
Lju225C5T9 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-08 64.3 76 44.7
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 1.8e-08 64.3 131 34.4
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 1.8e-08 64.3 333 20.4
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-08 63.9 136 31.6
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 2.3e-08 63.9 396 24.2
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 3.9e-08 63.2 96 34.4
Lj1g0005496 Lotus japonicus HOM05D000003 ORTHO05D007254 5.1e-08 62.8 129 31.0
Eucgr.B00966 Eucalyptus grandis HOM05D008183 ORTHO05D007254 6.7e-08 62.4 127 30.7
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 8.7e-08 62.0 85 31.8
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-07 61.6 85 40.0
CSS0034752 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.5e-07 61.2 296 23.6
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.9e-07 60.8 103 35.0
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-07 60.5 275 24.0
RhsimUnG0169300 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-07 60.1 119 28.6
vmacro21511 Vaccinium macrocarpon HOM05D000235 ORTHO05D000147 7.4e-07 58.9 87 37.9
CSS0034453 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.7e-07 58.5 118 30.5
FvH4_6g30670 Fragaria vesca HOM05D021529 ORTHO05D009449 9.7e-07 58.5 130 30.8
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 9.7e-07 58.5 90 33.3
Rhsim13G0061700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.7e-07 58.5 123 29.3
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 338 23.1
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-06 58.2 80 36.2
COL.COLO4_08881 Corchorus olitorius HOM05D000003 ORTHO05D009449 2.2e-06 57.4 201 25.4
BcaC02g08831 Brassica carinata HOM05D000003 ORTHO05D000004 2.8e-06 57.0 176 26.7
BcaC06g35689 Brassica carinata HOM05D000003 ORTHO05D000004 2.8e-06 57.0 312 23.4
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.8e-06 57.0 63 44.4
CANSAT21G1936 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-06 56.6 271 24.4
Lj1g0019137 Lotus japonicus HOM05D000003 ORTHO05D007254 3.7e-06 56.6 130 33.1
Atru.chr7.419 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-06 56.2 255 26.3
COL.COLO4_20252 Corchorus olitorius HOM05D000003 ORTHO05D007254 4.8e-06 56.2 135 28.9
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 6.3e-06 55.8 102 32.4
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 6.3e-06 55.8 79 34.2
Lj2g0023475 Lotus japonicus HOM05D000003 ORTHO05D007254 8.2e-06 55.5 231 26.4


User provided reference genes

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