Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.5e-192 676.0 334 100.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 7.9e-146 520.8 332 78.6
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 4.5e-141 505.0 336 76.5
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 4.2e-139 498.4 337 75.1
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.1e-131 473.8 335 71.9
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 8.2e-127 457.6 347 67.1
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.4e-126 456.8 354 66.1
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 1.4e-126 456.8 288 77.1
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 2.4e-126 456.1 333 68.8
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 4.1e-126 455.3 309 72.5
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.3e-124 450.3 308 70.8
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.2e-124 449.5 345 67.0
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 5.0e-124 448.4 343 65.3
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 6.5e-124 448.0 334 68.9
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 2.5e-123 446.0 300 72.3
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 3.2e-123 445.7 308 70.1
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 3.2e-123 445.7 331 68.9
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.7e-122 442.6 336 68.5
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 3.3e-120 435.6 309 68.0
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 7.4e-120 434.5 332 66.6
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 2.2e-119 433.0 336 65.5
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.2e-119 433.0 301 70.1
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 2.8e-119 432.6 319 67.7
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 2.8e-119 432.6 312 67.6
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 6.3e-119 431.4 301 69.1
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.8e-118 429.9 329 67.5
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 2.4e-118 429.5 320 71.2
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 9.1e-118 427.6 326 65.0
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 2.0e-117 426.4 331 64.7
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 3.4e-117 425.6 330 65.2
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 3.4e-117 425.6 309 68.6
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 3.8e-116 422.2 329 66.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 6.5e-116 421.4 326 62.9
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 3.6e-114 415.6 329 63.2
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 3.6e-114 415.6 326 61.7
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.8e-113 413.3 310 65.5
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 1.1e-112 410.6 307 65.1
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 1.1e-112 410.6 301 66.4
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 2.0e-112 409.8 337 63.5
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 3.3e-112 409.1 343 63.0
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 4.4e-112 408.7 312 64.4
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 1.7e-111 406.8 316 64.6
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.8e-111 406.0 328 62.5
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 8.2e-111 404.4 292 66.4
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 1.8e-110 403.3 316 63.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 4.1e-110 402.1 300 64.0
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 7.0e-110 401.4 296 64.5
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 9.1e-110 401.0 331 59.8
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.6e-109 399.4 307 64.5
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 7.7e-109 397.9 311 63.7
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.3e-108 397.1 315 61.9
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 8.5e-108 394.4 326 60.4
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 1.1e-107 394.0 300 66.0
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.5e-107 393.7 326 60.7
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 3.2e-107 392.5 326 60.7
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 3.2e-107 392.5 327 60.2
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 4.2e-107 392.1 315 61.3
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.2e-106 390.6 366 57.9
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.8e-105 386.7 280 69.3
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.3e-105 386.3 331 58.6
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 6.7e-105 384.8 318 61.0
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 3.3e-104 382.5 273 68.5
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 4.4e-104 382.1 295 66.4
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 3.7e-103 379.0 318 60.4
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 9.1e-102 374.4 319 59.9
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 1.6e-101 373.6 318 59.7
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 2.7e-101 372.9 334 58.4
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 5.9e-101 371.7 278 68.0
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 3.2e-99 365.9 302 60.6
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 7.2e-99 364.8 325 56.9
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.7e-98 362.1 329 57.8
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 4.0e-97 359.0 251 69.3
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.3e-95 354.0 301 56.5
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.8e-95 352.8 331 57.4
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 3.7e-95 352.4 303 57.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 4.1e-94 349.0 343 53.1
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.7e-90 335.5 312 59.3
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.0e-80 303.5 213 70.9
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 6.4e-79 298.5 210 68.6
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 3.0e-76 289.7 219 65.3
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.0e-76 289.7 360 50.0
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.6e-74 283.9 283 55.1
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.6e-74 283.9 330 44.2
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 4.0e-73 279.3 215 64.7
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 5.8e-72 275.4 213 62.9
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.3e-71 274.2 275 55.6
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.4e-70 270.0 211 63.5
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.9e-67 260.4 247 55.9
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.2e-58 231.1 170 66.5
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 2.9e-55 219.9 297 41.1
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.9e-52 209.5 290 45.2
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.6e-50 204.1 296 41.2
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.0e-48 197.2 341 39.9
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 3.8e-47 193.0 149 66.4
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 1.9e-46 190.7 128 71.9
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 2.7e-45 186.8 216 44.9
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 9.9e-40 168.3 110 74.5
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.2e-39 167.2 124 67.7
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.7e-37 160.2 131 59.5
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 4.6e-37 159.5 299 32.8
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 5.1e-36 156.0 99 76.8
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 1.6e-34 151.0 102 74.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 7.1e-30 135.6 97 71.1
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 4.6e-29 132.9 80 67.5
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 1.1e-25 121.7 178 42.7
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 9.0e-25 118.6 87 66.7
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.3e-23 114.8 99 56.6
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.4e-22 111.3 89 60.7
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 4.2e-22 109.8 89 59.6
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 4.2e-22 109.8 270 27.8
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 5.5e-22 109.4 167 32.9
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 3.7e-18 96.7 65 67.7
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 5.1e-12 76.3 141 39.7
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.2e-10 70.9 152 33.6
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.2e-10 70.9 152 33.6
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.8e-10 69.7 152 33.6
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.6e-08 63.9 41 73.2
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.0e-07 62.0 43 69.8
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 1.0e-07 62.0 139 31.7
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 7.2e-06 55.8 38 71.1


User provided reference genes

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