Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 8.2e-99 363.6 171 100.0
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.4e-66 255.8 204 67.2
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.1e-53 213.8 172 64.5
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.1e-53 213.8 172 64.5
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 2.3e-53 212.6 172 64.0
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 2.3e-53 212.6 172 64.0
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.1e-53 212.2 172 64.0
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 8.9e-53 210.7 172 63.4
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 8.9e-53 210.7 172 63.4
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 8.9e-53 210.7 172 62.8
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.5e-52 209.9 172 62.8
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 2.0e-52 209.5 172 63.4
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.6e-52 209.1 172 62.8
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.6e-52 209.1 171 61.4
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 3.4e-52 208.8 172 62.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 5.8e-52 208.0 172 62.8
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 7.6e-52 207.6 172 62.2
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 7.6e-52 207.6 172 63.4
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.6e-52 207.6 171 62.0
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.6e-52 207.6 171 62.0
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.3e-51 206.8 172 60.5
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.7e-51 206.5 172 61.0
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.2e-51 206.1 172 62.2
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 2.9e-51 205.7 171 61.4
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.9e-51 205.7 171 61.4
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.9e-51 205.7 171 61.4
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.9e-51 205.7 172 61.0
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.9e-51 205.7 171 61.4
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 3.7e-51 205.3 171 60.8
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 6.4e-51 204.5 172 61.0
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 6.4e-51 204.5 172 61.6
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 6.4e-51 204.5 171 62.0
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 6.4e-51 204.5 172 60.5
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 8.3e-51 204.1 171 61.4
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 8.3e-51 204.1 171 61.4
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.1e-50 203.8 172 59.9
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.4e-50 203.4 171 60.2
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.9e-50 203.0 172 62.2
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.9e-50 203.0 171 62.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.2e-50 202.2 172 60.5
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 3.2e-50 202.2 172 59.9
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 4.1e-50 201.8 172 59.9
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.1e-50 201.8 171 60.2
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 4.1e-50 201.8 172 58.7
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 4.1e-50 201.8 171 59.6
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 5.4e-50 201.4 172 60.5
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 5.4e-50 201.4 172 59.3
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.2e-49 200.3 171 60.2
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.2e-49 200.3 172 59.3
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.1e-49 199.5 172 61.6
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 2.1e-49 199.5 171 57.9
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 2.7e-49 199.1 171 58.5
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 2.7e-49 199.1 172 59.3
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 4.6e-49 198.4 172 59.9
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 6.0e-49 198.0 171 60.2
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 6.0e-49 198.0 171 60.2
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 6.0e-49 198.0 172 58.1
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 7.8e-49 197.6 171 59.1
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.7e-48 196.4 172 60.5
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 2.3e-48 196.1 171 58.5
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.0e-48 195.7 172 59.3
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 5.1e-48 194.9 171 56.1
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 6.6e-48 194.5 172 59.3
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 6.6e-48 194.5 171 59.6
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 8.6e-48 194.1 171 56.7
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 1.1e-47 193.7 172 58.1
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 1.1e-47 193.7 171 56.1
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.5e-47 193.4 172 58.7
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.5e-47 193.4 184 56.5
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.5e-47 193.4 172 58.1
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.5e-47 192.6 172 59.9
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 3.3e-47 192.2 196 53.6
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 5.6e-47 191.4 172 57.6
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.6e-46 189.9 172 56.4
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 2.8e-46 189.1 172 57.6
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 4.7e-46 188.3 171 57.3
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 6.2e-46 188.0 171 55.6
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 8.1e-46 187.6 172 57.6
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 8.1e-46 187.6 171 58.5
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 2.4e-45 186.0 172 58.7
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 4.0e-45 185.3 171 55.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.6e-44 182.6 172 55.8
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 7.6e-44 181.0 172 55.2
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 7.6e-44 181.0 171 53.2
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.1e-42 177.2 150 62.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 2.1e-41 172.9 172 51.7
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 2.1e-41 172.9 155 56.1
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 1.7e-40 169.9 172 52.3
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.3e-40 169.5 172 50.6
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 1.1e-39 167.2 172 51.7
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.3e-39 165.2 150 58.7
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.6e-38 163.3 172 48.3
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 2.1e-38 162.9 172 51.7
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 4.8e-38 161.8 172 51.7
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.1e-37 160.6 171 49.1
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.1e-37 160.6 150 57.3
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.9e-37 157.9 150 56.0
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.2e-36 157.1 169 47.9
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 2.0e-36 156.4 171 49.1
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 2.0e-36 156.4 171 49.1
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 2.6e-36 156.0 172 48.8
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 4.4e-36 155.2 172 48.3
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 9.9e-36 154.1 171 49.1
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.8e-35 152.1 171 49.1
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 6.4e-35 151.4 172 47.1
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 8.4e-35 151.0 171 48.0
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 4.2e-34 148.7 167 48.5
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.6e-33 146.7 169 46.2
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.6e-33 146.7 169 46.2
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 3.4e-28 129.0 166 44.6
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 3.8e-27 125.6 160 41.2
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.1e-25 119.8 127 49.6
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.1e-25 119.8 127 49.6
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.0e-24 117.5 136 50.7
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 9.0e-21 104.4 67 71.6
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.0e-20 103.2 59 78.0
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.0e-20 103.2 59 78.0
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.0e-20 103.2 69 71.0
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 6.5e-19 98.2 127 42.5
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 8.4e-19 97.8 54 81.5
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.2e-18 95.9 127 42.5
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 5.5e-18 95.1 60 68.3
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 6.0e-17 91.7 59 67.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 3.9e-16 89.0 124 41.1
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 3.9e-16 89.0 124 41.1
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 7.4e-15 84.7 45 91.1
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 5.3e-13 78.6 44 81.8
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 8.4e-11 71.2 48 72.9
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.2e-06 56.6 40 62.5
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 6.3e-06 55.1 61 44.3


User provided reference genes

Program Settings