Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 0.0e+00 1200.7 584 100.0
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 1.4e-262 909.4 593 78.1
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 3.3e-248 861.7 562 76.5
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 2.6e-237 825.5 492 83.7
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 5.3e-222 774.6 578 66.1
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 1.3e-220 770.0 529 73.0
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 6.5e-220 767.7 587 65.2
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 1.4e-219 766.5 583 66.7
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 1.9e-219 766.1 583 66.7
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 3.0e-217 758.8 571 66.0
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 3.0e-217 758.8 570 67.5
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 8.2e-215 750.7 589 63.0
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 9.0e-214 747.3 581 64.5
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.5e-213 746.5 619 63.3
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 1.4e-211 740.0 569 66.6
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 6.1e-210 734.6 589 63.5
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 3.9e-209 731.9 587 65.4
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 6.7e-209 731.1 589 64.2
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 8.8e-209 730.7 589 64.0
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 1.8e-206 723.0 577 64.3
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 6.9e-206 721.1 564 64.2
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 1.2e-205 720.3 537 65.4
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.0e-205 719.5 576 64.1
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.9e-204 715.7 540 64.3
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 2.5e-203 712.6 537 64.8
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 2.5e-203 712.6 591 61.6
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 9.4e-203 710.7 591 61.4
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 1.4e-201 706.8 569 61.3
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 5.1e-201 704.9 585 62.2
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 5.7e-200 701.4 571 59.9
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 4.1e-198 695.3 562 61.4
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 1.5e-197 693.3 574 59.6
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 1.3e-196 690.3 574 59.4
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 1.2e-194 683.7 488 70.5
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.1e-194 682.9 671 55.4
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 3.6e-194 682.2 540 62.8
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 1.4e-193 680.2 544 62.7
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 6.3e-191 671.4 599 59.6
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 9.1e-190 667.5 594 58.4
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 3.5e-189 665.6 584 57.0
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 7.2e-187 657.9 585 58.1
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 2.7e-181 639.4 535 59.4
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 7.7e-181 637.9 520 62.9
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 1.2e-178 630.6 572 53.0
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 2.7e-178 629.4 574 55.9
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 3.6e-178 629.0 543 55.1
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.8e-177 626.7 592 58.4
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 3.1e-174 615.9 589 58.4
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 5.4e-174 615.1 500 63.8
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 7.7e-173 611.3 579 52.2
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 8.6e-172 607.8 583 54.4
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 1.5e-171 607.1 531 55.6
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 6.1e-170 601.7 584 54.5
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 2.8e-167 592.8 595 53.9
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 5.4e-166 588.6 457 63.0
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 1.9e-163 580.1 538 52.2
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 9.2e-158 561.2 480 57.7
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 6.0e-141 505.4 563 46.7
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 6.4e-135 485.3 480 54.8
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 4.4e-128 462.6 512 48.0
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 6.5e-111 405.6 544 40.8
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 3.5e-109 399.8 361 57.9
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 1.0e-108 398.3 584 45.4
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 2.2e-95 354.0 547 37.8
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 1.7e-90 337.8 302 57.3
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 4.4e-83 313.2 271 58.3
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 5.7e-83 312.8 212 68.9
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 4.1e-81 306.6 351 45.9
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 5.3e-81 306.2 552 35.3
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 2.2e-79 300.8 189 76.2
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 1.3e-74 285.0 322 50.6
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 6.5e-71 272.7 537 33.7
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 4.1e-65 253.4 378 38.1
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 1.5e-59 235.0 614 30.0
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 1.7e-55 221.5 127 83.5
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 3.5e-48 197.2 564 29.1
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 9.8e-43 179.1 188 47.3
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 4.1e-41 173.7 249 38.2
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.5e-38 165.2 238 37.0
vmacro02288 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 4.3e-30 137.1 93 81.7
HPP92_001749 Vanilla planifolia HOM05D000267 ORTHO05D009944 3.6e-29 134.0 85 74.1
RcHm_v2.0_Chr6g0255791 Rosa chinensis HOM05D000267 ORTHO05D009944 1.4e-28 132.1 90 67.8
Lj9A400T56 Lonicera japonica HOM05D000267 ORTHO05D009944 1.1e-25 122.5 74 81.1
CARHR111810 Cardamine hirsuta HOM05D000267 ORTHO05D009944 1.0e-23 115.9 90 60.0
Thecc.02G059600 Theobroma cacao HOM05D000267 ORTHO05D009944 1.2e-21 109.0 80 68.8
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 5.8e-19 100.1 173 34.7
RcHm_v2.0_Chr2g0123001 Rosa chinensis HOM05D000267 ORTHO05D009944 1.0e-15 89.4 70 60.0
SEGI_37732 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 2.4e-12 78.2 109 38.5


User provided reference genes

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