Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 1.1e-44 183.0 91 100.0
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 1.3e-34 149.4 74 100.0
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 6.4e-34 147.1 74 98.6
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 1.1e-33 146.4 74 98.6
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.4e-33 146.0 74 97.3
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 1.9e-33 145.6 74 97.3
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 2.4e-33 145.2 74 97.3
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 2.4e-33 145.2 74 97.3
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 3.2e-33 144.8 74 97.3
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 3.2e-33 144.8 74 95.9
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 4.2e-33 144.4 74 97.3
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 5.5e-33 144.1 74 95.9
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 5.5e-33 144.1 74 95.9
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 5.5e-33 144.1 74 95.9
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 9.3e-33 143.3 74 95.9
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 9.3e-33 143.3 74 94.6
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 1.2e-32 142.9 72 97.2
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 1.2e-32 142.9 74 94.6
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 1.2e-32 142.9 74 94.6
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 1.2e-32 142.9 74 94.6
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 1.6e-32 142.5 74 94.6
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 1.6e-32 142.5 74 94.6
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 1.6e-32 142.5 74 94.6
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 1.6e-32 142.5 73 95.9
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 1.6e-32 142.5 74 94.6
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 2.7e-32 141.7 74 94.6
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 2.7e-32 141.7 74 93.2
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 2.7e-32 141.7 74 94.6
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 3.5e-32 141.4 74 94.6
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 3.5e-32 141.4 74 94.6
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 3.5e-32 141.4 74 93.2
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 4.6e-32 141.0 74 93.2
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 4.6e-32 141.0 74 91.9
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 6.0e-32 140.6 74 94.6
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 6.0e-32 140.6 74 91.9
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 6.0e-32 140.6 71 95.8
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 7.9e-32 140.2 74 93.2
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 7.9e-32 140.2 72 94.4
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 7.9e-32 140.2 72 94.4
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 7.9e-32 140.2 73 91.8
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 1.0e-31 139.8 74 93.2
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 1.3e-31 139.4 74 93.2
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 1.3e-31 139.4 74 91.9
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 1.3e-31 139.4 74 91.9
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 1.3e-31 139.4 71 94.4
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 1.8e-31 139.0 74 91.9
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.8e-31 139.0 74 91.9
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 1.8e-31 139.0 72 93.1
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 1.8e-31 139.0 74 93.2
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 2.3e-31 138.7 74 90.5
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 3.0e-31 138.3 72 91.7
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 3.9e-31 137.9 74 90.5
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 3.9e-31 137.9 74 89.2
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 3.9e-31 137.9 74 91.9
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 3.9e-31 137.9 74 91.9
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 3.9e-31 137.9 74 91.9
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 8.7e-31 136.7 74 87.8
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.5e-30 136.0 75 88.0
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 2.5e-30 135.2 72 90.3
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 2.5e-30 135.2 72 90.3
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 2.5e-30 135.2 72 90.3
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 2.5e-30 135.2 74 89.2
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 2.5e-30 135.2 72 90.3
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 3.3e-30 134.8 84 77.4
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 4.3e-30 134.4 74 86.5
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 4.3e-30 134.4 71 90.1
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 7.4e-30 133.7 74 87.8
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 7.4e-30 133.7 74 85.1
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.4e-30 133.7 74 85.1
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.4e-30 133.7 74 85.1
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.4e-30 133.7 74 85.1
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 9.6e-30 133.3 72 90.3
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 9.6e-30 133.3 72 90.3
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 1.6e-29 132.5 74 86.5
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 2.1e-29 132.1 72 88.9
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.8e-29 131.7 74 86.5
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 3.7e-29 131.3 74 83.8
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 3.7e-29 131.3 68 92.6
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 4.8e-29 131.0 72 88.9
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 8.2e-29 130.2 84 82.1
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 1.4e-28 129.4 70 87.1
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.4e-28 129.4 74 86.5
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.4e-28 129.4 97 72.2
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.4e-28 129.4 97 72.2
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 1.8e-28 129.0 71 87.3
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.8e-28 129.0 70 85.7
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 3.1e-28 128.3 70 85.7
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 5.3e-28 127.5 70 85.7
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 5.3e-28 127.5 70 85.7
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 5.3e-28 127.5 70 85.7
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 5.3e-28 127.5 70 85.7
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 2.0e-27 125.6 70 85.7
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 2.6e-27 125.2 70 84.3
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 2.6e-27 125.2 72 83.3
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 3.4e-27 124.8 68 85.3
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 3.4e-27 124.8 68 85.3
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 4.5e-27 124.4 70 80.0
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 5.8e-27 124.0 67 85.1
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 7.6e-27 123.6 73 80.8
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 7.6e-27 123.6 72 81.9
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 1.0e-26 123.2 70 80.0
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.7e-26 122.5 60 95.0
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.7e-26 122.5 68 82.4
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 2.2e-26 122.1 70 80.0
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 2.2e-26 122.1 70 80.0
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 2.2e-26 122.1 70 82.9
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 2.9e-26 121.7 67 83.6
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 3.8e-26 121.3 79 72.2
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 4.9e-26 120.9 70 78.6
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 4.9e-26 120.9 70 78.6
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 6.5e-26 120.6 76 76.3
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 9.3e-25 116.7 68 82.4
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 1.6e-24 115.9 72 72.2
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 1.6e-24 115.9 138 51.4
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 1.3e-23 112.8 133 51.1
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 3.9e-23 111.3 76 65.8
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 5.1e-23 110.9 69 75.4
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 2.8e-21 105.1 73 63.0
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.0e-15 86.7 61 75.4
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 2.8e-13 78.6 73 56.2
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 3.4e-11 71.6 36 86.1
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 1.2e-08 63.2 82 46.3
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 1.4e-07 59.7 36 69.4
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 5.1e-07 57.8 29 93.1
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 2.6e-06 55.5 27 96.3
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 4.4e-06 54.7 27 92.6


User provided reference genes

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