Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0187300 Rhododendron simsii HOM05D000003 ORTHO05D000283 2.3e-173 612.1 301 100.0
Atru.chr6.660 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-18 96.7 190 33.2
vmacro03128 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 3.4e-15 86.7 122 36.9
Atru.chr3.1845 Acer truncatum HOM05D000003 ORTHO05D000283 9.9e-15 85.1 126 34.1
Atru.chr5.1992 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-14 84.7 128 34.4
Atru.chr5.1984 Acer truncatum HOM05D000003 ORTHO05D000283 2.2e-14 84.0 126 34.1
Atru.chr11.551 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-13 79.7 126 32.5
TAR195G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 9.3e-13 78.6 129 35.7
FvH4_2g05581 Fragaria vesca HOM05D000003 ORTHO05D000004 1.8e-11 74.3 116 35.3
Sabra16G0322000 Salix brachista HOM05D000003 ORTHO05D000007 1.8e-11 74.3 100 40.0
Atru.chr9.194 Acer truncatum HOM05D000003 ORTHO05D000283 8.7e-11 72.0 126 31.7
TAR214G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000283 1.1e-10 71.6 119 36.1
Atru.chr8.560 Acer truncatum HOM05D000003 ORTHO05D000283 2.5e-10 70.5 128 28.9
CSS0044337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-10 69.7 119 32.8
Atru.chr7.161 Acer truncatum HOM05D000003 ORTHO05D000283 7.4e-10 68.9 56 48.2
Dinv05579 Davidia involucrata HOM05D000003 ORTHO05D000283 7.4e-10 68.9 84 40.5
Oeu054808.1 Olea europaea HOM05D000003 ORTHO05D000283 1.3e-09 68.2 126 28.6
Dinv26275 Davidia involucrata HOM05D000723 ORTHO05D001760 3.7e-09 66.6 88 36.4
BcaB04g17521 Brassica carinata HOM05D000003 ORTHO05D000283 4.8e-09 66.2 125 35.2
Sabra01G0063500 Salix brachista HOM05D000003 ORTHO05D000283 4.8e-09 66.2 57 45.6
Sabra07G0063500 Salix brachista HOM05D000003 ORTHO05D000283 4.8e-09 66.2 67 38.8
FvH4_6g30971 Fragaria vesca HOM05D000003 ORTHO05D000283 1.1e-08 65.1 103 35.0
Potri.010G000101 Populus trichocarpa HOM05D000003 ORTHO05D000004 1.4e-08 64.7 102 36.3
Atru.chr10.517 Acer truncatum HOM05D000003 ORTHO05D000283 1.8e-08 64.3 128 28.9
Atru.chr7.164 Acer truncatum HOM05D000003 ORTHO05D000283 1.8e-08 64.3 93 31.2
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.8e-08 64.3 125 31.2
CSS0022152 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-08 64.3 122 32.0
Potri.004G000150 Populus trichocarpa HOM05D000003 ORTHO05D000283 2.4e-08 63.9 100 34.0
Oeu010858.1 Olea europaea HOM05D000003 ORTHO05D000283 3.1e-08 63.5 132 31.1
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 4.0e-08 63.2 120 30.8
CSS0043070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-08 62.0 122 31.1
BolC9t57812H Brassica oleracea HOM05D000003 ORTHO05D000283 1.2e-07 61.6 107 33.6
BraA05t20329Z Brassica rapa HOM05D000003 ORTHO05D000004 1.5e-07 61.2 123 26.8
Carub.0005s1087 Capsella rubella HOM05D000003 ORTHO05D000283 1.5e-07 61.2 65 41.5
Rhsim04G0200800 Rhododendron simsii HOM05D000489 ORTHO05D000372 1.5e-07 61.2 111 36.0
BolC9t54942H Brassica oleracea HOM05D000003 ORTHO05D000283 2.6e-07 60.5 138 31.9
CSS0020474 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-07 60.5 174 26.4
Oeu010859.1 Olea europaea HOM05D000003 ORTHO05D000004 2.6e-07 60.5 129 31.0
Sabra09G0132000 Salix brachista HOM05D000003 ORTHO05D000283 2.6e-07 60.5 103 33.0
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 2.6e-07 60.5 116 31.0
Dinv04241 Davidia involucrata HOM05D013547 ORTHO05D000283 3.4e-07 60.1 66 40.9
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 4.5e-07 59.7 127 32.3
Sabra09G0009900 Salix brachista HOM05D000003 ORTHO05D000283 4.5e-07 59.7 100 34.0
CSS0025070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 5.8e-07 59.3 126 28.6
CSS0048868 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.8e-07 59.3 177 24.9
THA.LOC109116418 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.8e-07 59.3 147 27.2
vmacro10184 Vaccinium macrocarpon HOM05D000049 ORTHO05D000283 7.6e-07 58.9 54 53.7
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.0e-06 58.5 125 30.4
ECA236G2536 Erigeron canadensis HOM05D000003 ORTHO05D000283 1.0e-06 58.5 105 28.6
ECA238G3409 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-06 58.5 121 30.6
PSO423G0058 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-06 58.5 129 27.9
ECA232G3446 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-06 58.2 102 28.4
PGR119G1009 Punica granatum HOM05D000003 ORTHO05D000283 1.3e-06 58.2 61 37.7
AL5G25040 Arabidopsis lyrata HOM05D000003 ORTHO05D011072 1.7e-06 57.8 85 35.3
ECA234G0523 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-06 57.4 130 27.7
HanXRQChr05g0134571 Helianthus annuus HOM05D000003 ORTHO05D000004 2.2e-06 57.4 64 37.5
HanXRQChr05g0134601 Helianthus annuus HOM05D000003 ORTHO05D000004 2.2e-06 57.4 64 37.5
BraA01t00216Z Brassica rapa HOM05D000003 ORTHO05D000283 2.9e-06 57.0 104 33.7
HanXRQChr09g0251101 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-06 57.0 101 30.7
HanXRQChr13g0389411 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-06 57.0 64 35.9
Aqoxy5G03631 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-06 56.6 126 26.2
BcaB07g30964 Brassica carinata HOM05D000003 ORTHO05D000283 3.8e-06 56.6 92 34.8
BolC6t36024H Brassica oleracea HOM05D000003 ORTHO05D000283 3.8e-06 56.6 117 30.8
Sabra18G0037800 Salix brachista HOM05D003631 ORTHO05D000007 3.8e-06 56.6 100 33.0
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 4.9e-06 56.2 48 45.8
ECA234G2874 Erigeron canadensis HOM05D000003 ORTHO05D000283 4.9e-06 56.2 103 26.2
ECA236G2229 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-06 56.2 94 33.0
Oeu001880.1 Olea europaea HOM05D000003 ORTHO05D000283 4.9e-06 56.2 64 32.8
Aqoxy2G01641 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 6.5e-06 55.8 57 43.9
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 6.5e-06 55.8 100 36.0
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 6.5e-06 55.8 116 28.4
PGR142G2091 Punica granatum HOM05D000003 ORTHO05D000283 6.5e-06 55.8 122 27.0
BcaC03g18409 Brassica carinata HOM05D000003 ORTHO05D000283 8.4e-06 55.5 122 35.2
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 8.4e-06 55.5 59 40.7
BolC3t17602H Brassica oleracea HOM05D000003 ORTHO05D000283 8.4e-06 55.5 125 30.4
BolC3t20403H Brassica oleracea HOM05D000003 ORTHO05D000283 8.4e-06 55.5 59 39.0
Sabra11G0018000 Salix brachista HOM05D000022 ORTHO05D000283 8.4e-06 55.5 66 33.3
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 8.4e-06 55.5 109 32.1
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 8.4e-06 55.5 103 28.2


User provided reference genes

Program Settings