Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.1e-55 219.5 102 100.0
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.6e-12 76.3 50 60.0
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.5e-10 68.9 47 59.6
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 2.5e-10 68.9 67 46.3
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 3.3e-10 68.6 61 50.8
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.3e-10 68.2 34 73.5
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.3e-10 68.2 47 57.4
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.3e-10 68.2 61 49.2
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 5.6e-10 67.8 47 57.4
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 9.5e-10 67.0 47 59.6
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 9.5e-10 67.0 47 55.3
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 1.2e-09 66.6 61 47.5
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.2e-09 66.6 47 55.3
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 1.6e-09 66.2 45 57.8
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.6e-09 66.2 33 72.7
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 1.6e-09 66.2 33 72.7
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 1.6e-09 66.2 47 55.3
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.6e-09 66.2 61 49.2
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.1e-09 65.9 61 50.8
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 2.1e-09 65.9 47 53.2
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.1e-09 65.9 61 45.9
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 2.8e-09 65.5 47 57.4
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 2.8e-09 65.5 61 47.5
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 3.6e-09 65.1 47 53.2
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 3.6e-09 65.1 47 53.2
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 3.6e-09 65.1 61 45.9
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 3.6e-09 65.1 47 55.3
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 4.7e-09 64.7 31 77.4
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 4.7e-09 64.7 31 77.4
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 4.7e-09 64.7 47 53.2
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 4.7e-09 64.7 61 49.2
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 4.7e-09 64.7 47 57.4
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.2e-09 64.3 53 50.9
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 6.2e-09 64.3 61 47.5
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 6.2e-09 64.3 32 78.1
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 8.0e-09 63.9 47 55.3
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 8.0e-09 63.9 47 51.1
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 8.0e-09 63.9 47 55.3
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.1e-08 63.5 31 77.4
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 1.1e-08 63.5 47 51.1
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 1.1e-08 63.5 67 46.3
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.1e-08 63.5 47 55.3
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 1.1e-08 63.5 47 51.1
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.4e-08 63.2 45 55.6
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.4e-08 63.2 45 55.6
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.4e-08 63.2 47 48.9
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.4e-08 63.2 47 53.2
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.4e-08 63.2 47 53.2
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.8e-08 62.8 47 53.2
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 2.3e-08 62.4 44 54.5
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.3e-08 62.4 61 44.3
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.3e-08 62.4 61 44.3
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 2.3e-08 62.4 47 48.9
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 2.3e-08 62.4 31 71.0
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 2.3e-08 62.4 37 67.6
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 3.1e-08 62.0 32 62.5
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.1e-08 62.0 45 57.8
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 3.1e-08 62.0 47 53.2
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 4.0e-08 61.6 61 44.3
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 4.0e-08 61.6 47 48.9
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.0e-08 61.6 47 55.3
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 6.8e-08 60.8 31 77.4
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 6.8e-08 60.8 47 55.3
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 6.8e-08 60.8 58 50.0
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.8e-08 60.8 31 71.0
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 6.8e-08 60.8 31 67.7
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 6.8e-08 60.8 47 51.1
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 6.8e-08 60.8 31 71.0
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 6.8e-08 60.8 31 71.0
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 6.8e-08 60.8 61 42.6
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 6.8e-08 60.8 61 45.9
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 8.9e-08 60.5 65 44.6
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 8.9e-08 60.5 31 67.7
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 8.9e-08 60.5 31 67.7
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.2e-07 60.1 47 51.1
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.2e-07 60.1 31 67.7
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 1.5e-07 59.7 45 51.1
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 2.0e-07 59.3 61 42.6
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 2.6e-07 58.9 41 53.7
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 4.4e-07 58.2 31 64.5
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 4.4e-07 58.2 47 55.3
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 5.8e-07 57.8 47 51.1
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 5.8e-07 57.8 31 64.5
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 7.5e-07 57.4 61 41.0
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.5e-07 57.4 31 71.0
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 9.8e-07 57.0 38 63.2
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 9.8e-07 57.0 61 44.3
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 9.8e-07 57.0 47 42.6
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.7e-06 56.2 31 67.7
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.7e-06 56.2 31 74.2
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 2.2e-06 55.8 45 46.7
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 2.2e-06 55.8 31 71.0
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 2.9e-06 55.5 45 48.9
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 2.9e-06 55.5 61 41.0
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.9e-06 55.5 61 44.3
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.7e-06 55.1 47 51.1
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 3.7e-06 55.1 47 46.8
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 4.9e-06 54.7 31 71.0
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.9e-06 54.7 24 91.7
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 4.9e-06 54.7 31 71.0
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 6.4e-06 54.3 33 57.6
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 8.3e-06 53.9 32 68.8
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 8.3e-06 53.9 43 46.5
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 8.3e-06 53.9 31 71.0


User provided reference genes

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