Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0184400 Rhododendron simsii HOM05D030420 ORTHO05D011552 8.0e-103 377.1 189 100.0
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 6.6e-57 224.6 189 61.9
CSS0013547 Camellia sinensis var. sinensis HOM05D030420 ORTHO05D043339 2.5e-19 99.8 154 41.6
CSS0033663 Camellia sinensis var. sinensis HOM05D030420 ORTHO05D043339 2.5e-19 99.8 154 41.6
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 6.0e-18 95.1 114 43.0
TWI75G0567 Tripterygium wilfordii HOM05D009526 ORTHO05D011552 3.0e-17 92.8 111 43.2
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 9.6e-16 87.8 139 38.8
Duzib132G0500 Durio zibethinus HOM05D009526 ORTHO05D011552 5.8e-13 78.6 87 49.4
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 3.8e-12 75.9 92 43.5
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 5.5e-11 72.0 189 27.5
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.6e-10 70.5 74 40.5
AL4G10370 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 3.5e-10 69.3 94 36.2
AT2G21237 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 4.6e-10 68.9 132 31.1
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 1.3e-09 67.4 66 42.4
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 1.3e-09 67.4 66 43.9
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 1.3e-09 67.4 66 42.4
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 1.8e-09 67.0 65 44.6
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 3.0e-09 66.2 66 42.4
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 8.7e-09 64.7 128 28.1
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.1e-08 64.3 122 29.5
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 1.5e-08 63.9 66 40.9
Sc16g0010960 Simmondsia chinensis HOM05D009526 ORTHO05D011552 1.5e-08 63.9 76 36.8
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 4.3e-08 62.4 111 29.7
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 4.3e-08 62.4 111 29.7
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 5.7e-08 62.0 67 35.8
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 7.4e-08 61.6 78 37.2
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 3.7e-07 59.3 91 35.2
Thhalv10027568m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 1.1e-06 57.8 103 29.1
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 1.8e-06 57.0 86 34.9
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 1.8e-06 57.0 86 34.9
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 2.4e-06 56.6 112 29.5
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 5.3e-06 55.5 91 33.0


User provided reference genes

Program Settings