Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 2.1e-299 1031.6 512 100.0
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 3.3e-236 821.6 442 91.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 2.6e-225 785.4 462 84.2
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.5e-220 769.6 512 76.2
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.2e-217 760.0 496 78.2
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.0e-213 746.9 473 78.9
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 1.8e-213 746.1 509 75.6
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.1e-212 743.4 518 74.5
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 5.3e-210 734.6 508 74.4
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.0e-209 732.6 470 77.7
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.7e-208 729.6 470 77.4
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.2e-208 729.2 506 73.1
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 6.5e-208 727.6 443 81.0
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 8.5e-208 727.2 469 77.8
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.1e-207 726.9 536 70.5
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 7.2e-207 724.2 435 80.7
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.2e-206 723.4 510 72.0
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.6e-206 723.0 509 71.7
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.6e-206 723.0 473 77.4
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 6.1e-206 721.1 445 80.9
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 3.0e-205 718.8 511 70.8
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 8.8e-205 717.2 428 81.5
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.1e-204 716.8 461 76.4
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 2.6e-204 715.7 463 76.9
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.3e-204 715.3 428 82.2
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 5.7e-204 714.5 468 76.3
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 7.4e-204 714.1 470 74.9
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 7.4e-204 714.1 446 78.7
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 2.2e-203 712.6 447 78.5
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.8e-203 712.2 428 81.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 4.8e-203 711.4 552 67.0
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.8e-202 709.5 469 74.6
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.4e-202 709.1 428 81.5
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.7e-200 703.0 437 78.9
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 2.9e-200 702.2 437 78.3
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 2.9e-200 702.2 488 71.7
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.0e-200 701.4 510 70.8
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 5.0e-200 701.4 499 71.5
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.1e-199 700.3 447 76.5
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.9e-199 699.5 472 74.8
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 4.2e-199 698.4 494 71.3
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 5.5e-199 698.0 437 77.6
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 4.7e-198 694.9 464 75.9
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.3e-197 692.6 497 69.4
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.8e-195 684.9 425 76.9
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.4e-194 683.3 488 69.7
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.4e-194 682.6 466 73.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 9.1e-194 680.6 451 74.7
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.3e-192 676.8 454 74.7
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 2.2e-192 676.0 428 74.5
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 2.9e-192 675.6 436 75.9
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 3.8e-192 675.2 452 74.1
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 6.5e-192 674.5 425 78.1
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 6.5e-192 674.5 428 74.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 8.5e-192 674.1 572 62.9
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.2e-191 671.8 428 74.3
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 5.5e-191 671.4 428 74.3
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 2.1e-190 669.5 428 74.1
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.0e-189 667.2 428 73.8
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.4e-189 666.8 427 74.2
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.8e-189 666.4 425 74.1
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.8e-189 666.4 457 72.2
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.1e-186 657.1 489 69.5
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 3.8e-184 648.7 431 73.8
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 5.0e-184 648.3 499 67.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.1e-183 647.1 378 83.9
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 6.1e-182 641.3 439 72.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.8e-181 639.8 384 80.5
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.0e-181 638.6 384 80.7
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 5.7e-180 634.8 443 74.9
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 5.7e-180 634.8 379 81.3
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.8e-178 629.8 445 71.0
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.0e-176 624.0 385 77.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.5e-175 619.4 381 76.4
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 6.1e-174 614.8 446 69.7
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 3.0e-173 612.5 379 75.7
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.2e-172 610.5 425 71.8
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 3.9e-168 595.5 334 86.2
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.2e-164 583.9 427 68.6
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 2.0e-164 583.2 441 66.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 3.2e-162 575.9 450 65.3
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.7e-161 572.8 425 69.2
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 2.3e-160 569.7 512 60.9
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.2e-156 557.4 447 64.4
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.5e-153 545.8 352 74.4
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.0e-152 544.3 440 60.7
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 9.5e-151 537.7 425 61.9
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.6e-150 537.0 409 65.5
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 2.3e-144 516.5 332 73.2
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 3.3e-143 512.7 316 78.5
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 5.1e-136 488.8 441 56.9
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.2e-129 467.6 464 54.3
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.1e-118 430.3 305 69.2
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.0e-112 411.4 468 46.8
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 4.6e-105 386.0 246 74.8
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 1.6e-97 360.9 440 46.8
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 2.7e-97 360.1 320 60.3
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 1.0e-96 358.2 320 60.3
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 4.5e-92 342.8 202 79.7
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 2.0e-84 317.4 268 57.5
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 5.2e-80 302.8 225 71.1
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 1.0e-72 278.5 211 67.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.5e-66 256.1 179 69.3
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 5.7e-63 246.1 325 48.6
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 8.6e-59 232.3 450 38.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 1.4e-56 224.9 164 68.9
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.4e-37 159.8 115 63.5
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.2e-33 148.7 93 76.3
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.4e-32 145.2 87 81.6
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.3e-27 128.6 89 70.8
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.8e-17 94.4 58 74.1
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 6.0e-12 76.6 42 88.1
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.2e-07 62.4 37 73.0
Glyma.07G113951 Glycine max HOM05D007030 ORTHO05D215801 8.4e-06 56.2 33 69.7


User provided reference genes

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