Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 8.8e-57 224.2 112 100.0
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.0e-40 169.9 103 84.5
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.5e-40 167.9 103 83.5
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.2e-39 166.4 104 83.7
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.0e-33 147.5 103 71.8
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.8e-33 144.8 103 70.9
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.1e-27 127.5 95 66.3
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 7.8e-21 104.8 103 55.3
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 7.3e-19 98.2 102 58.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.8e-17 93.6 112 52.7
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.4e-16 89.4 102 46.1
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.3e-15 87.4 111 48.6
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.9e-15 86.3 111 48.6
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.4e-15 85.1 107 45.8
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.4e-14 84.0 115 43.5
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.1e-14 82.4 131 38.2
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.2e-14 81.3 114 46.5
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.2e-13 80.9 80 52.5
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 1.0e-12 77.8 112 46.4
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.0e-12 77.8 115 46.1
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.7e-12 77.0 115 46.1
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 5.1e-12 75.5 106 45.3
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.1e-11 74.3 66 59.1
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.9e-11 73.6 114 39.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.5e-11 73.2 94 45.7
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 9.5e-11 71.2 101 46.5
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 1.2e-10 70.9 92 44.6
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.6e-10 69.3 125 40.8
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.2e-10 68.6 95 43.2
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.4e-09 67.4 117 40.2
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 1.8e-09 67.0 109 37.6
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.3e-09 66.6 94 45.7
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.3e-09 66.6 99 43.4
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.0e-09 65.9 94 45.7
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 5.2e-09 65.5 99 43.4
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 8.9e-09 64.7 100 39.0
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 1.2e-08 64.3 83 48.2
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.5e-08 63.9 110 39.1
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 2.0e-08 63.5 112 39.3
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.0e-08 63.5 66 54.5
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 3.4e-08 62.8 102 40.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 4.4e-08 62.4 105 35.2
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 4.4e-08 62.4 98 40.8
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.6e-08 61.6 103 41.7
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.3e-07 60.8 46 56.5
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.3e-07 60.8 98 44.9
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 1.3e-07 60.8 116 36.2
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.7e-07 60.5 115 38.3
HanXRQChr04g0127911 Helianthus annuus HOM05D007556 ORTHO05D002252 1.7e-07 60.5 118 39.0
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 1.7e-07 60.5 91 42.9
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 1.7e-07 60.5 112 40.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 60.5 86 45.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.2e-07 60.1 93 41.9
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-07 60.1 84 45.2
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.9e-07 59.7 105 44.8
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.7e-07 59.3 99 45.5
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 3.7e-07 59.3 86 39.5
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.9e-07 58.9 98 42.9
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 6.4e-07 58.5 93 40.9
COL.COLO4_03329 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.4e-07 58.5 115 37.4
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 6.4e-07 58.5 95 40.0
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 6.4e-07 58.5 48 50.0
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 6.4e-07 58.5 64 46.9
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 6.4e-07 58.5 96 38.5
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 8.4e-07 58.2 62 46.8
CiPaw.06G136400 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.4e-06 57.4 97 38.1
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.9e-06 57.0 98 37.8
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 1.9e-06 57.0 100 38.0
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.4e-06 56.6 99 34.3
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 2.4e-06 56.6 92 44.6
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.2e-06 56.2 110 34.5
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 4.1e-06 55.8 95 41.1
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 7.1e-06 55.1 106 41.5
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 7.1e-06 55.1 49 53.1
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 7.1e-06 55.1 108 38.9
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 7.1e-06 55.1 64 46.9
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 9.2e-06 54.7 105 37.1


User provided reference genes

Program Settings