Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.3e-54 216.9 152 100.0
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.2e-54 214.5 152 99.3
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.6e-47 191.4 103 89.3
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.9e-42 176.4 127 81.9
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.5e-41 172.2 103 83.5
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.5e-39 166.0 127 76.4
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 5.1e-32 141.7 116 72.4
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 3.3e-23 112.5 103 60.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 4.3e-23 112.1 102 58.8
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 7.4e-23 111.3 98 60.2
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 4.1e-21 105.5 103 55.3
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 3.4e-20 102.4 95 54.7
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.3e-19 100.5 111 54.1
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.2e-17 94.0 106 48.1
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 4.7e-17 92.0 117 44.4
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.0e-16 90.9 95 47.4
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.3e-16 89.7 103 46.6
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 8.8e-16 87.8 103 46.6
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.5e-15 87.0 111 49.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.6e-15 86.3 103 46.6
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 3.3e-15 85.9 98 45.9
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.7e-15 85.1 103 48.5
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.7e-15 85.1 103 46.6
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 5.7e-15 85.1 96 46.9
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 7.4e-15 84.7 98 45.9
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.2e-14 83.2 95 48.4
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.8e-14 82.8 103 48.5
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 2.8e-14 82.8 69 59.4
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 6.3e-14 81.6 98 44.9
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 8.2e-14 81.3 93 47.3
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 1.4e-13 80.5 93 47.3
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.4e-13 79.7 93 46.2
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.4e-13 79.7 103 47.6
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 2.4e-13 79.7 103 43.7
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.1e-13 79.3 98 45.9
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 9.1e-13 77.8 125 40.0
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.1e-13 77.8 98 46.9
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.6e-12 76.3 104 45.2
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.4e-12 75.9 88 47.7
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.0e-11 74.3 104 45.2
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 1.3e-11 73.9 96 43.8
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 1.7e-11 73.6 104 45.2
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.7e-11 73.6 105 41.9
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 2.2e-11 73.2 100 41.0
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-11 73.2 99 46.5
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 3.8e-11 72.4 102 40.2
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 3.8e-11 72.4 99 49.5
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 3.8e-11 72.4 96 40.6
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.4e-10 70.5 122 37.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 70.1 90 45.6
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 1.9e-10 70.1 103 43.7
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.5e-10 69.7 96 38.5
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.5e-10 69.7 88 48.9
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 3.2e-10 69.3 98 40.8
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 4.2e-10 68.9 105 43.8
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 1.2e-09 67.4 93 37.6
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 2.1e-09 66.6 89 42.7
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 2.7e-09 66.2 103 41.7
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 2.7e-09 66.2 92 41.3
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 6.1e-09 65.1 95 44.2
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 8.0e-09 64.7 104 43.3
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 8.0e-09 64.7 98 37.8
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 8.0e-09 64.7 114 37.7
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 8.0e-09 64.7 93 39.8
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 8.0e-09 64.7 90 38.9
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 8.0e-09 64.7 112 35.7
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.4e-08 63.9 103 36.9
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 2.3e-08 63.2 104 38.5
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 2.3e-08 63.2 118 40.7
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 3.0e-08 62.8 93 36.6
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.0e-08 62.8 103 37.9
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.9e-08 62.4 114 37.7
TWI79G1510 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 6.7e-08 61.6 97 38.1
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 6.7e-08 61.6 89 39.3
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 8.8e-08 61.2 89 41.6
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 8.8e-08 61.2 112 38.4
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 8.8e-08 61.2 105 36.2
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 1.1e-07 60.8 102 38.2
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.1e-07 60.8 90 42.2
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 1.1e-07 60.8 93 35.5
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 1.1e-07 60.8 110 37.3
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.1e-07 60.8 95 40.0
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.1e-07 60.8 103 35.9
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 1.5e-07 60.5 103 36.9
TAR628G1279 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.5e-07 60.5 95 40.0
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 2.0e-07 60.1 106 34.0
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.0e-07 60.1 83 38.6
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 2.6e-07 59.7 92 39.1
Hma1.2p1_0066F.1_g036530 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 2.6e-07 59.7 93 39.8
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 2.6e-07 59.7 96 39.6
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.3e-07 59.3 93 39.8
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 3.3e-07 59.3 105 32.4
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 5.7e-07 58.5 92 39.1
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 1.3e-06 57.4 93 38.7
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 1.3e-06 57.4 97 37.1
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.7e-06 57.0 90 36.7
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 1.7e-06 57.0 92 38.0
Medtr3g116430 Medicago truncatula HOM05D010359 ORTHO05D002252 1.7e-06 57.0 98 36.7
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.2e-06 56.6 95 32.6
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 2.8e-06 56.2 94 38.3
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 2.8e-06 56.2 94 36.2
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.7e-06 55.8 122 33.6
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 4.8e-06 55.5 100 39.0
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 4.8e-06 55.5 84 41.7
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.3e-06 55.1 95 31.6
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 6.3e-06 55.1 95 35.8
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 8.2e-06 54.7 94 38.3
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 8.2e-06 54.7 49 53.1
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 8.2e-06 54.7 56 48.2


User provided reference genes

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