Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.9e-54 215.7 117 100.0
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.8e-13 79.0 105 41.9
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 8.1e-13 77.4 111 45.0
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.5e-11 73.2 105 41.9
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 3.4e-11 72.0 105 39.0
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 3.4e-11 72.0 105 40.0
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 4.4e-11 71.6 107 43.9
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 5.8e-11 71.2 105 43.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.2e-10 69.3 106 39.6
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.2e-10 69.3 106 40.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.9e-10 68.2 105 38.1
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 4.9e-10 68.2 105 37.1
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.4e-09 66.6 105 38.1
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.4e-09 66.6 114 39.5
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.4e-09 66.6 49 57.1
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.9e-09 66.2 105 38.1
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.9e-09 66.2 110 41.8
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.4e-09 65.9 105 38.1
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 2.4e-09 65.9 105 36.2
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 38.1
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 36.2
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 38.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 38.1
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 35.2
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.2e-09 65.5 105 38.1
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 5.4e-09 64.7 106 40.6
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 5.4e-09 64.7 105 39.0
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 5.4e-09 64.7 113 37.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 5.4e-09 64.7 113 38.9
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 7.1e-09 64.3 105 37.1
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 7.1e-09 64.3 105 35.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 9.2e-09 63.9 112 38.4
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 9.2e-09 63.9 106 35.8
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 9.2e-09 63.9 105 39.0
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.2e-08 63.5 105 38.1
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.2e-08 63.5 110 36.4
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.2e-08 63.5 105 37.1
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.6e-08 63.2 71 43.7
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.6e-08 63.2 46 56.5
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.1e-08 62.8 105 32.4
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 2.1e-08 62.8 105 34.3
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 2.7e-08 62.4 105 33.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.7e-08 62.4 105 36.2
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 3.5e-08 62.0 105 35.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 3.5e-08 62.0 105 36.2
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 3.5e-08 62.0 105 37.1
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 3.5e-08 62.0 105 37.1
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 3.5e-08 62.0 105 36.2
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 4.6e-08 61.6 46 54.3
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 4.6e-08 61.6 104 37.5
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 6.0e-08 61.2 104 39.4
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 6.0e-08 61.2 105 32.4
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 6.0e-08 61.2 105 31.4
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 6.0e-08 61.2 47 55.3
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 7.8e-08 60.8 105 32.4
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.0e-07 60.5 105 33.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.0e-07 60.5 110 36.4
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.3e-07 60.1 107 36.4
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.3e-07 60.1 107 36.4
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.3e-07 60.1 107 36.4
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.3e-07 60.1 46 60.9
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.3e-07 60.1 105 33.3
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.3e-07 60.1 105 35.2
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.3e-07 60.1 46 52.2
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.7e-07 59.7 105 34.3
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 3.0e-07 58.9 105 36.2
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 3.0e-07 58.9 98 37.8
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 5.1e-07 58.2 46 52.2
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 5.1e-07 58.2 98 37.8
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 6.6e-07 57.8 107 35.5
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 6.6e-07 57.8 116 31.9
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 6.6e-07 57.8 116 31.9
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.1e-06 57.0 106 34.9
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 1.1e-06 57.0 114 35.1
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.1e-06 57.0 103 35.0
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.1e-06 57.0 105 33.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.5e-06 56.6 106 35.8
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.5e-06 56.6 106 34.9
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.5e-06 56.6 105 35.2
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.5e-06 56.6 105 32.4
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.5e-06 56.6 105 37.1
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.9e-06 56.2 105 35.2
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 2.5e-06 55.8 102 34.3
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 3.3e-06 55.5 107 34.6
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 4.3e-06 55.1 111 37.8
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 5.6e-06 54.7 105 33.3
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 5.6e-06 54.7 105 34.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 7.3e-06 54.3 105 34.3
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 9.5e-06 53.9 107 34.6
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 9.5e-06 53.9 105 34.3
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 9.5e-06 53.9 105 33.3
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 9.5e-06 53.9 100 35.0


User provided reference genes

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