Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0168400 Rhododendron simsii HOM05D001841 ORTHO05D001767 5.4e-150 534.6 343 100.0
Dinv23581 Davidia involucrata HOM05D001841 ORTHO05D001767 1.1e-30 138.3 384 34.9
vmacro19487 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 7.3e-30 135.6 388 36.9
Actinidia12979 Actinidia chinensis HOM05D001841 ORTHO05D001767 4.0e-28 129.8 356 35.7
Dinv42133 Davidia involucrata HOM05D001841 ORTHO05D001767 2.9e-26 123.6 290 39.7
Actinidia00458 Actinidia chinensis HOM05D001841 ORTHO05D001767 1.9e-25 120.9 345 34.5
Prupe.8G119300 Prunus persica HOM05D001841 ORTHO05D001767 4.6e-24 116.3 402 30.8
Rhsim05G0081500 Rhododendron simsii HOM05D001841 ORTHO05D001767 3.9e-23 113.2 316 36.4
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 3.3e-22 110.2 350 31.1
Sabra09G0080500 Salix brachista HOM05D001841 ORTHO05D001767 4.3e-22 109.8 397 30.5
Potri.009G105400 Populus trichocarpa HOM05D001841 ORTHO05D001767 7.3e-22 109.0 359 30.9
FAN15G3466 Fragaria x ananassa HOM05D001841 ORTHO05D001767 4.8e-21 106.3 389 31.4
RcHm_v2.0_Chr6g0258711 Rosa chinensis HOM05D001841 ORTHO05D001767 6.2e-21 105.9 425 29.4
FAN24G1402 Fragaria x ananassa HOM05D001841 ORTHO05D001767 8.1e-21 105.5 389 31.1
FvH4_2g06670 Fragaria vesca HOM05D001841 ORTHO05D001767 1.4e-20 104.8 389 31.1
Actinidia27944 Actinidia chinensis HOM05D000058 ORTHO05D001767 2.4e-20 104.0 349 31.8
FAN20G1156 Fragaria x ananassa HOM05D001841 ORTHO05D001767 2.4e-20 104.0 389 31.1
TAR381G0762 Trochodendron aralioides HOM05D001841 ORTHO05D001767 4.0e-20 103.2 405 31.1
Gorai.013G042200 Gossypium raimondii HOM05D001841 ORTHO05D001767 6.9e-20 102.4 382 32.2
Nitab4.5_0000736g0050 Nicotiana tabacum HOM05D001841 ORTHO05D001767 1.2e-19 101.7 347 30.5
Hma1.2p1_0370F.1_g138000 Hydrangea macrophylla HOM05D001841 ORTHO05D001767 1.5e-19 101.3 366 30.6
Lj4g0016353 Lotus japonicus HOM05D001841 ORTHO05D001767 2.0e-19 100.9 345 30.7
Gohir.D13G037500 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.6e-19 100.5 382 31.7
Gohir.A13G039000 Gossypium hirsutum HOM05D001841 ORTHO05D001767 3.4e-19 100.1 382 32.5
Sabra04G0095000 Salix brachista HOM05D001841 ORTHO05D001767 4.4e-19 99.8 375 29.6
Thecc.08G013800 Theobroma cacao HOM05D001841 ORTHO05D001767 9.9e-19 98.6 405 29.6
MD10G1090600 Malus domestica HOM05D001841 ORTHO05D001767 4.9e-18 96.3 404 29.2
Potri.004G143500 Populus trichocarpa HOM05D001841 ORTHO05D001767 6.4e-18 95.9 400 30.5
MELO3C021907.2 Cucumis melo HOM05D001841 ORTHO05D001767 8.4e-18 95.5 385 29.4
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 1.1e-17 95.1 385 28.6
Thecc.02G097700 Theobroma cacao HOM05D001841 ORTHO05D001767 1.1e-17 95.1 406 28.6
Oeu013688.1 Olea europaea HOM05D001841 ORTHO05D001767 2.4e-17 94.0 385 30.9
CiPaw.06G142300 Carya illinoinensis HOM05D001841 ORTHO05D001767 3.2e-17 93.6 364 29.1
Nitab4.5_0001413g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 7.1e-17 92.4 347 31.1
PGR142G1787 Punica granatum HOM05D001841 ORTHO05D001767 7.1e-17 92.4 375 27.7
Manes.15G142400 Manihot esculenta HOM05D001841 ORTHO05D001767 2.1e-16 90.9 408 28.2
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 2.7e-16 90.5 389 28.3
Duzib093G1523 Durio zibethinus HOM05D001841 ORTHO05D001767 3.5e-16 90.1 410 28.8
Duzib132G0939 Durio zibethinus HOM05D001841 ORTHO05D001767 3.5e-16 90.1 372 28.2
Lj4C50T9 Lonicera japonica HOM05D001841 ORTHO05D001767 3.5e-16 90.1 326 28.8
Lsat_1_v5_gn_5_113300 Lactuca sativa HOM05D001841 ORTHO05D001767 1.3e-15 88.2 352 30.1
CANSAT25G1334 Cannabis sativa HOM05D001841 ORTHO05D001767 1.7e-15 87.8 390 30.5
Cfa005454 Carpinus fangiana HOM05D001841 ORTHO05D001767 1.7e-15 87.8 382 29.6
MELO3C018439.2 Cucumis melo HOM05D001841 ORTHO05D001767 2.3e-15 87.4 375 30.7
Manes.17G093500 Manihot esculenta HOM05D001841 ORTHO05D001767 2.3e-15 87.4 373 27.9
AL3G47510 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 3.0e-15 87.0 376 27.9
Potri.014G034900 Populus trichocarpa HOM05D001841 ORTHO05D001767 3.0e-15 87.0 387 28.2
vmacro04468 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 3.0e-15 87.0 362 27.3
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 5.1e-15 86.3 365 29.3
Duzib248G1481 Durio zibethinus HOM05D001841 ORTHO05D001767 6.6e-15 85.9 414 27.3
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 6.6e-15 85.9 263 35.4
Duzib116G0233 Durio zibethinus HOM05D001841 ORTHO05D001767 1.1e-14 85.1 393 27.5
Cc02_g18570 Coffea canephora HOM05D001841 ORTHO05D001767 1.9e-14 84.3 365 28.5
Eucgr.I01168 Eucalyptus grandis HOM05D001841 ORTHO05D001767 1.9e-14 84.3 360 29.4
Sc08g0000020 Simmondsia chinensis HOM05D001841 ORTHO05D001767 1.9e-14 84.3 320 28.4
Haze_01864 Corylus avellana HOM05D001841 ORTHO05D001767 2.5e-14 84.0 386 29.3
AT2G15760 Arabidopsis thaliana HOM05D001841 ORTHO05D001767 5.6e-14 82.8 351 27.4
CiPaw.05G053900 Carya illinoinensis HOM05D001841 ORTHO05D001767 9.6e-14 82.0 365 30.1
Ca_18656_v3 Cicer arietinum L. HOM05D001841 ORTHO05D001767 9.6e-14 82.0 353 29.7
MSTRG.20139 Avicennia marina HOM05D001841 ORTHO05D001767 1.3e-13 81.6 360 28.6
Duzib052G0781 Durio zibethinus HOM05D001841 ORTHO05D001767 1.3e-13 81.6 380 28.2
CsaV3_2G014120 Cucumis sativus L. HOM05D001841 ORTHO05D001767 2.8e-13 80.5 355 28.7
CsaV3_7G008710 Cucumis sativus L. HOM05D001841 ORTHO05D001767 2.8e-13 80.5 374 29.4
Cpa.g.sc376.7 Carica papaya HOM05D001841 ORTHO05D001767 3.6e-13 80.1 362 29.8
Gohir.A12G025600 Gossypium hirsutum HOM05D001841 ORTHO05D001767 3.6e-13 80.1 361 29.4
SalBow6G4282 Salvia bowleyana HOM05D001841 ORTHO05D001767 3.6e-13 80.1 367 29.4
Gohir.A01G006300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 4.8e-13 79.7 347 27.7
Nn1g05855 Nelumbo nucifera HOM05D001841 ORTHO05D001767 4.8e-13 79.7 336 28.6
TAR376G0142 Trochodendron aralioides HOM05D001841 ORTHO05D001767 4.8e-13 79.7 383 25.3
Gohir.D01G006300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 8.1e-13 79.0 345 27.8
Gorai.002G007300 Gossypium raimondii HOM05D001841 ORTHO05D001767 8.1e-13 79.0 345 28.4
PSO541G1997 Papaver somniferum HOM05D001841 ORTHO05D001767 8.1e-13 79.0 348 27.3
ClCG02G005790 Citrullus lanatus HOM05D001841 ORTHO05D001767 1.1e-12 78.6 374 28.6
Glyma.02G134500 Glycine max HOM05D001841 ORTHO05D001767 1.1e-12 78.6 366 28.4
Glyma.07G210700 Glycine max HOM05D001841 ORTHO05D001767 1.1e-12 78.6 363 27.8
Medtr4g086620 Medicago truncatula HOM05D001841 ORTHO05D001767 1.1e-12 78.6 369 27.9
QL02p006055 Quercus lobata HOM05D001841 ORTHO05D001767 1.1e-12 78.6 330 26.4
COL.COLO4_32685 Corchorus olitorius HOM05D001841 ORTHO05D001767 1.4e-12 78.2 274 29.2
MBI02_g21198_MAGBIO Magnolia biondii HOM05D001841 ORTHO05D001767 1.8e-12 77.8 363 27.0
QL11p037275 Quercus lobata HOM05D001841 ORTHO05D001767 1.8e-12 77.8 406 27.3
Sed0008283 Sechium edule HOM05D001841 ORTHO05D001767 1.8e-12 77.8 368 35.1
MBI06_g08193_MAGBIO Magnolia biondii HOM05D001841 ORTHO05D001767 2.4e-12 77.4 355 26.8
PSO675G9020 Papaver somniferum HOM05D001841 ORTHO05D001767 3.1e-12 77.0 352 27.0
TWI31G1305 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 4.0e-12 76.6 377 27.1
CARHR106090 Cardamine hirsuta HOM05D001841 ORTHO05D001767 6.9e-12 75.9 353 28.0
Gohir.A05G199948 Gossypium hirsutum HOM05D001841 ORTHO05D001767 9.0e-12 75.5 305 31.5
Migut.B00315 Erythranthe guttata HOM05D001841 ORTHO05D001767 2.0e-11 74.3 387 33.1
Gorai.009G209200 Gossypium raimondii HOM05D001841 ORTHO05D001767 2.0e-11 74.3 265 32.8
ClCG09G017450 Citrullus lanatus HOM05D001841 ORTHO05D001767 2.6e-11 73.9 383 28.2
Gohir.D12G025300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.6e-11 73.9 351 29.3
PGR083G2104 Punica granatum HOM05D001841 ORTHO05D001767 3.4e-11 73.6 400 26.8
TAR625G0113 Trochodendron aralioides HOM05D001841 ORTHO05D001767 3.4e-11 73.6 385 26.2
AUR62016627 Chenopodium quinoa HOM05D001841 ORTHO05D001767 4.5e-11 73.2 361 28.5
Gorai.008G025600 Gossypium raimondii HOM05D001841 ORTHO05D001767 4.5e-11 73.2 351 29.3
Thhalv10022784m.g Eutrema salsugineum HOM05D001841 ORTHO05D001767 5.8e-11 72.8 357 27.7
THA.LOC104819587 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 7.6e-11 72.4 364 26.6
Lalb_Chr16g0384591 Lupinus albus HOM05D001841 ORTHO05D001767 9.9e-11 72.0 370 28.4
RcHm_v2.0_Chr6g0307061 Rosa chinensis HOM05D001841 ORTHO05D001767 1.3e-10 71.6 364 25.8
CAN.G1166.17 Capsicum annuum HOM05D001841 ORTHO05D001767 2.2e-10 70.9 173 37.0
Nitab4.5_0004334g0030 Nicotiana tabacum HOM05D001841 ORTHO05D001767 2.2e-10 70.9 352 28.1
AL4G19390 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 2.9e-10 70.5 265 32.1
Carub.0003s2959 Capsella rubella HOM05D001841 ORTHO05D001767 2.9e-10 70.5 354 26.0
Gohir.D05G203200 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.9e-10 70.5 263 32.3
Rhsim07G0231600 Rhododendron simsii HOM05D001841 ORTHO05D001767 2.9e-10 70.5 363 26.4
AT2G26530 Arabidopsis thaliana HOM05D001841 ORTHO05D001767 3.8e-10 70.1 272 32.0
Sp3g29010 Schrenkiella parvula HOM05D001841 ORTHO05D001767 4.9e-10 69.7 353 26.9
Carub.0004s0670 Capsella rubella HOM05D001841 ORTHO05D001767 6.4e-10 69.3 265 30.6
THA.LOC104807355 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 6.4e-10 69.3 351 32.5
Ciclev10001332m.g Citrus clementina HOM05D001841 ORTHO05D001767 8.4e-10 68.9 169 35.5
Prupe.1G441300 Prunus persica HOM05D001841 ORTHO05D001767 8.4e-10 68.9 312 29.2
Cpa.g.sc62.35 Carica papaya HOM05D001841 ORTHO05D001767 1.1e-09 68.6 397 25.9
Atru.chr13.625 Acer truncatum HOM05D001841 ORTHO05D001767 1.4e-09 68.2 277 30.3
Dinv02063 Davidia involucrata HOM05D014864 ORTHO05D001767 1.4e-09 68.2 78 55.1
CiPaw.15G063600 Carya illinoinensis HOM05D001841 ORTHO05D001767 2.4e-09 67.4 329 28.3
BcaB03g16318 Brassica carinata HOM05D001841 ORTHO05D001767 3.2e-09 67.0 334 29.3
CDE10G1358 Ceratophyllum demersum HOM05D001841 ORTHO05D001767 3.2e-09 67.0 367 27.0
SGA_v2.0_scaffold32G13089 Striga asiatica HOM05D001841 ORTHO05D001767 4.2e-09 66.6 363 26.4
CDE10G1361 Ceratophyllum demersum HOM05D001841 ORTHO05D001767 5.4e-09 66.2 366 25.7
Cc10_g03940 Coffea canephora HOM05D001841 ORTHO05D001767 5.4e-09 66.2 367 25.6
Gohir.D02G212700 Gossypium hirsutum HOM05D001841 ORTHO05D001767 5.4e-09 66.2 39 76.9
Ciclev10028742m.g Citrus clementina HOM05D001841 ORTHO05D001767 7.1e-09 65.9 384 27.3
FAN15G0715 Fragaria x ananassa HOM05D001841 ORTHO05D001767 7.1e-09 65.9 388 26.8
A09p10870 Brassica napus HOM05D001841 ORTHO05D001767 9.3e-09 65.5 351 26.8
BraA09t36727Z Brassica rapa HOM05D001841 ORTHO05D001767 9.3e-09 65.5 351 26.8
FAN27G1965 Fragaria x ananassa HOM05D001841 ORTHO05D001767 9.3e-09 65.5 392 26.5
TWI75G0920 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 9.3e-09 65.5 356 27.0
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 9.3e-09 65.5 356 29.2
CDE03G0088 Ceratophyllum demersum HOM05D000370 ORTHO05D001767 1.2e-08 65.1 360 27.2
GSVIVG01009563001 Vitis vinifera HOM05D001841 ORTHO05D001767 1.2e-08 65.1 124 38.7
Lsat_1_v5_gn_7_87380 Lactuca sativa HOM05D001841 ORTHO05D001767 1.6e-08 64.7 363 26.2
Sp4g07730 Schrenkiella parvula HOM05D001841 ORTHO05D001767 1.6e-08 64.7 280 30.7
Atru.chr5.2772 Acer truncatum HOM05D001841 ORTHO05D001767 2.7e-08 63.9 379 27.7
BcaB07g31782 Brassica carinata HOM05D001841 ORTHO05D001767 2.7e-08 63.9 351 27.1
BcaC06g36083 Brassica carinata HOM05D001841 ORTHO05D001767 2.7e-08 63.9 334 28.4
C07p08040 Brassica napus HOM05D001841 ORTHO05D001767 2.7e-08 63.9 334 28.4
BolC7t41221H Brassica oleracea HOM05D001841 ORTHO05D001767 2.7e-08 63.9 334 28.4
EL10Ac9g21828 Beta vulgaris HOM05D001841 ORTHO05D001767 3.5e-08 63.5 349 27.8
Solyc03g112700.1 Solanum lycopersicum HOM05D001841 ORTHO05D001767 3.5e-08 63.5 234 30.8
Sopen03g031780 Solanum pennellii HOM05D001841 ORTHO05D001767 3.5e-08 63.5 234 30.8
BraA07t28298Z Brassica rapa HOM05D001841 ORTHO05D001767 4.6e-08 63.2 334 28.4
CDE06G1867 Ceratophyllum demersum HOM05D000370 ORTHO05D001366 4.6e-08 63.2 368 27.2
Gohir.A03G087800 Gossypium hirsutum HOM05D001841 ORTHO05D001767 4.6e-08 63.2 289 29.4
Psat7g121880 Pisum sativum HOM05D001841 ORTHO05D001767 4.6e-08 63.2 373 26.5
TWI79G0295 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 6.0e-08 62.8 354 28.0
BcaC04g23039 Brassica carinata HOM05D001841 ORTHO05D001767 7.9e-08 62.4 351 26.5
C09p12820 Brassica napus HOM05D001841 ORTHO05D001767 7.9e-08 62.4 351 26.5
BolC9t54171H Brassica oleracea HOM05D001841 ORTHO05D001767 7.9e-08 62.4 351 26.5
CANSAT25G3674 Cannabis sativa HOM05D001841 ORTHO05D001767 7.9e-08 62.4 344 25.3
FAN20G1917 Fragaria x ananassa HOM05D001841 ORTHO05D001767 7.9e-08 62.4 391 26.3
Gohir.D02G092900 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.0e-07 62.0 289 28.7
Aqoxy5G01297 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 1.3e-07 61.6 346 27.7
Aqoxy6G01410 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 1.3e-07 61.6 280 30.7
BcaB06g27216 Brassica carinata HOM05D001841 ORTHO05D001767 1.3e-07 61.6 267 30.0
AUR62011434 Chenopodium quinoa HOM05D001841 ORTHO05D001767 1.3e-07 61.6 151 35.8
COL.COLO4_26453 Corchorus olitorius HOM05D001841 ORTHO05D001767 1.8e-07 61.2 91 44.0
TWI56G0311 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 2.3e-07 60.8 258 29.1
FvH4_2g34940 Fragaria vesca HOM05D001841 ORTHO05D001767 3.0e-07 60.5 391 26.9
MD15G1087600 Malus domestica HOM05D001841 ORTHO05D001767 3.0e-07 60.5 390 26.4
Potri.002G128500 Populus trichocarpa HOM05D001841 ORTHO05D001767 3.0e-07 60.5 296 29.4
PGSC0003DMG400018102 Solanum tuberosum HOM05D001841 ORTHO05D001767 3.0e-07 60.5 230 31.3
TWI36G0039 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 3.0e-07 60.5 347 25.1
Manes.18G034400 Manihot esculenta HOM05D001841 ORTHO05D001767 3.9e-07 60.1 376 26.6
Sed0014858 Sechium edule HOM05D001841 ORTHO05D001767 3.9e-07 60.1 108 40.7
Dinv42626 Davidia involucrata HOM05D001841 ORTHO05D001767 5.1e-07 59.7 86 40.7
FAN17G2325 Fragaria x ananassa HOM05D001841 ORTHO05D001767 5.1e-07 59.7 35 77.1
Nitab4.5_0001899g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 5.1e-07 59.7 271 31.4
MD08G1106900 Malus domestica HOM05D001841 ORTHO05D001767 6.7e-07 59.3 296 27.4
Sabra14G0024800 Salix brachista HOM05D001841 ORTHO05D001767 6.7e-07 59.3 381 24.7
HanXRQChr11g0324211 Helianthus annuus HOM05D001841 ORTHO05D001767 8.7e-07 58.9 241 31.1
Actinidia29858 Actinidia chinensis HOM05D000370 ORTHO05D001366 1.5e-06 58.2 320 25.6
Cfa006567 Carpinus fangiana HOM05D001841 ORTHO05D001767 1.5e-06 58.2 121 38.8
Lsat_1_v5_gn_4_124961 Lactuca sativa HOM05D001841 ORTHO05D001767 1.5e-06 58.2 372 24.5
CiPaw.16G048100 Carya illinoinensis HOM05D001841 ORTHO05D001767 1.9e-06 57.8 278 28.4
Gohir.D01G106700 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.5e-06 57.4 264 31.1
Gorai.005G104600 Gossypium raimondii HOM05D001841 ORTHO05D001767 2.5e-06 57.4 289 28.0
Sabra02G0100700 Salix brachista HOM05D001841 ORTHO05D001767 2.5e-06 57.4 391 25.6
Manes.05G170500 Manihot esculenta HOM05D001841 ORTHO05D001767 3.3e-06 57.0 235 31.5
Oeu009759.1 Olea europaea HOM05D001841 ORTHO05D001767 3.3e-06 57.0 148 34.5
Cfa018506 Carpinus fangiana HOM05D001841 ORTHO05D001767 4.3e-06 56.6 320 25.3
FAN21G2199 Fragaria x ananassa HOM05D001841 ORTHO05D001767 4.3e-06 56.6 32 78.1
HanXRQChr04g0128301 Helianthus annuus HOM05D001841 ORTHO05D001767 5.6e-06 56.2 313 25.9
ATR0097G009 Amborella trichopoda HOM05D001841 ORTHO05D001767 7.4e-06 55.8 395 25.6
A07p05070 Brassica napus HOM05D001841 ORTHO05D001767 7.4e-06 55.8 340 27.9
FAN05G4268 Fragaria x ananassa HOM05D001841 ORTHO05D001767 9.6e-06 55.5 31 80.6
FAN27G1419 Fragaria x ananassa HOM05D001841 ORTHO05D001767 9.6e-06 55.5 31 80.6


User provided reference genes

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