Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.1e-78 296.6 157 100.0
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 1.3e-58 229.9 158 81.0
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 1.3e-58 229.9 159 81.1
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 7.2e-57 224.2 157 77.7
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 7.4e-54 214.2 158 74.1
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.3e-47 192.6 157 66.2
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 8.8e-47 190.7 157 66.9
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 1.1e-46 190.3 156 66.7
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 1.5e-46 189.9 157 66.9
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 4.4e-46 188.3 157 66.2
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 7.4e-46 187.6 154 64.9
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 9.7e-46 187.2 157 65.0
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 1.7e-45 186.4 157 65.6
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 2.2e-45 186.0 159 66.0
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 1.4e-44 183.3 157 65.0
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.2e-43 180.3 159 65.4
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.2e-43 180.3 145 67.6
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 3.4e-43 178.7 149 65.8
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 5.9e-43 177.9 197 54.3
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 7.7e-43 177.6 159 62.9
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.0e-42 177.2 144 64.6
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 5.0e-42 174.9 158 61.4
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 1.1e-41 173.7 158 63.3
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.1e-41 173.7 132 70.5
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 1.4e-41 173.3 158 62.0
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 7.2e-41 171.0 128 69.5
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.2e-40 170.2 157 61.8
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 6.1e-40 167.9 158 60.8
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 7.9e-40 167.5 139 68.3
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 1.4e-39 166.8 130 68.5
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.4e-39 166.8 159 57.9
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 3.0e-39 165.6 157 63.1
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 3.0e-39 165.6 128 69.5
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 3.0e-39 165.6 160 60.0
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 3.9e-39 165.2 155 60.0
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 6.7e-39 164.5 150 62.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 5.7e-38 161.4 156 60.9
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.7e-38 161.4 159 57.2
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.7e-38 161.4 159 57.2
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 9.7e-38 160.6 130 65.4
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.7e-37 159.8 126 66.7
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 2.8e-37 159.1 158 58.2
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.7e-37 158.7 144 62.5
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 1.8e-36 156.4 153 56.2
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 2.4e-36 156.0 159 56.0
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.4e-36 156.0 163 58.9
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 3.1e-36 155.6 185 50.8
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 4.1e-36 155.2 130 64.6
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 1.2e-35 153.7 158 58.9
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 1.6e-35 153.3 154 57.1
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 1.6e-35 153.3 154 57.1
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 2.0e-35 152.9 154 57.1
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.6e-35 152.5 164 57.3
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 4.5e-35 151.8 158 55.1
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.5e-35 151.8 164 56.1
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 5.9e-35 151.4 154 56.5
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 7.7e-35 151.0 100 86.0
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 7.7e-35 151.0 154 56.5
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 7.7e-35 151.0 160 57.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 1.0e-34 150.6 156 53.8
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.0e-34 150.6 155 55.5
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.7e-34 149.8 164 57.3
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 2.9e-34 149.1 153 54.2
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 6.5e-34 147.9 153 54.9
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 6.5e-34 147.9 131 60.3
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 1.1e-33 147.1 126 61.9
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 1.9e-33 146.4 157 54.8
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.9e-33 146.4 159 56.0
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 9.4e-33 144.1 153 54.9
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 1.2e-32 143.7 157 54.1
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.7e-32 142.5 158 54.4
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 8.0e-32 141.0 159 52.2
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 1.4e-31 140.2 155 54.8
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.8e-31 137.5 127 61.4
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 8.8e-31 137.5 152 54.6
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.5e-30 136.7 156 51.9
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 5.7e-30 134.8 174 47.1
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.7e-29 133.3 162 50.0
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 2.2e-29 132.9 156 52.6
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 3.7e-29 132.1 159 49.7
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 4.8e-29 131.7 160 47.5
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 6.3e-29 131.3 143 55.2
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-28 130.6 156 51.9
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 1.1e-28 130.6 128 62.5
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 4.1e-28 128.6 161 49.7
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 7.0e-28 127.9 128 57.0
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 2.0e-27 126.3 114 63.2
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 4.5e-27 125.2 130 55.4
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 5.9e-27 124.8 133 53.4
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.7e-27 124.4 133 56.4
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 2.2e-26 122.9 149 51.7
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 2.2e-26 122.9 159 48.4
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 2.2e-26 122.9 159 48.4
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 1.1e-25 120.6 161 49.1
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.1e-24 116.3 100 65.0
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 3.6e-24 115.5 148 46.6
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 6.1e-24 114.8 114 58.8
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.0e-23 114.0 132 51.5
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 1.4e-23 113.6 144 48.6
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 3.4e-22 109.0 93 68.8
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 7.5e-22 107.8 161 45.3
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.2e-19 100.5 115 52.2
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.0e-19 99.8 86 64.0
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 1.0e-18 97.4 81 66.7
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.3e-18 97.1 100 56.0
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 6.5e-18 94.7 81 65.4
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 1.1e-17 94.0 117 55.6
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.9e-17 93.2 171 42.7
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 3.3e-17 92.4 106 50.0
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 5.5e-17 91.7 136 41.9
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 9.5e-17 90.9 141 44.0
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.1e-16 89.7 85 57.6
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.8e-16 89.4 106 48.1
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.7e-16 88.6 74 63.5
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 6.1e-16 88.2 110 54.5
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 1.8e-15 86.7 115 52.2
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 4.0e-15 85.5 117 44.4
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 5.2e-15 85.1 113 45.1
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 5.2e-15 85.1 111 48.6
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 6.8e-15 84.7 100 55.0
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 1.2e-14 84.0 116 43.1
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 2.6e-14 82.8 113 52.2
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 3.4e-14 82.4 158 38.0
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.4e-12 77.0 138 42.8
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.2e-11 73.9 141 41.1
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 1.6e-11 73.6 77 50.6
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 2.0e-11 73.2 110 41.8
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 6.6e-10 68.2 79 50.6
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 2.1e-08 63.2 139 36.0
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 1.4e-07 60.5 93 43.0
Cre06.g248800 Chlamydomonas reinhardtii HOM05D045397 ORTHO05D005864 3.0e-07 59.3 147 36.1
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 4.0e-07 58.9 68 52.9


User provided reference genes

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