Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 0.0e+00 1288.1 679 100.0
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 0.0e+00 1232.2 687 96.1
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.2e-310 1069.3 681 85.5
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.3e-258 894.4 682 72.4
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.0e-256 890.2 682 72.1
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.3e-251 873.2 682 72.4
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.6e-241 839.7 677 69.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.6e-223 778.1 681 64.5
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 8.0e-214 747.7 624 67.9
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 8.3e-211 737.6 671 63.8
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 3.3e-207 725.7 659 61.9
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 7.5e-204 714.5 678 63.0
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 4.6e-201 705.3 671 61.0
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 6.6e-200 701.4 671 60.7
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 9.5e-199 697.6 685 59.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.6e-198 696.8 666 61.0
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.2e-196 690.6 680 58.7
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.6e-196 689.5 670 61.2
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.3e-195 687.2 670 60.1
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.9e-195 686.0 678 57.4
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.8e-195 685.6 671 58.3
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.9e-191 673.3 685 59.3
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.6e-191 671.8 678 59.3
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 4.8e-190 668.7 676 58.4
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 4.9e-187 658.7 678 59.3
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.4e-186 657.1 665 58.6
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 9.3e-186 654.4 671 58.7
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 5.1e-184 648.7 679 56.6
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 8.7e-184 647.9 689 56.0
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 3.3e-183 646.0 711 55.1
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 4.0e-181 639.0 671 55.3
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 9.0e-181 637.9 667 57.0
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.6e-180 636.3 695 56.1
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.6e-180 636.3 695 56.1
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.8e-180 635.2 671 55.1
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 8.4e-179 631.3 671 54.5
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 8.4e-179 631.3 705 55.0
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 2.4e-178 629.8 672 56.5
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 5.4e-178 628.6 673 56.3
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 5.4e-178 628.6 673 56.2
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 3.5e-177 625.9 672 56.2
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 7.9e-177 624.8 658 55.8
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.0e-176 624.4 673 56.8
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 3.0e-176 622.9 649 57.8
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 6.7e-176 621.7 738 52.0
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 8.7e-176 621.3 666 56.5
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.1e-175 620.9 665 56.2
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 9.0e-173 611.3 659 55.4
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.5e-172 610.5 670 54.3
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.9e-170 603.6 804 48.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 5.5e-170 602.1 670 54.0
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 4.6e-169 599.0 675 53.6
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.3e-168 596.7 689 53.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 2.5e-167 593.2 675 53.3
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.3e-166 590.9 642 55.3
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 2.8e-166 589.7 709 50.4
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 7.6e-164 581.6 547 61.2
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 2.2e-163 580.1 677 53.0
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 4.2e-162 575.9 673 52.0
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 4.6e-161 572.4 669 52.8
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 2.8e-158 563.1 681 52.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 9.0e-157 558.1 621 55.2
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 2.0e-156 557.0 686 52.3
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.7e-155 553.9 670 50.9
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.7e-153 546.6 674 50.7
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 2.3e-152 543.5 669 51.0
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 8.8e-152 541.6 666 50.8
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.0e-151 540.4 788 45.2
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.2e-150 537.0 671 50.2
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 8.2e-150 535.0 708 48.7
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 6.9e-149 531.9 671 50.1
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.5e-148 529.3 428 66.1
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 5.9e-148 528.9 701 49.1
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.3e-147 527.7 665 50.7
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.4e-146 524.2 650 50.3
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.9e-146 523.9 708 48.4
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 7.2e-146 521.9 701 48.8
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 3.6e-145 519.6 699 47.9
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 4.7e-145 519.2 676 47.3
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.0e-144 518.1 701 48.5
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.4e-144 517.7 550 55.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.3e-142 511.1 614 50.8
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 7.7e-140 501.9 671 46.6
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 3.0e-136 490.0 461 61.2
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 3.7e-134 483.0 458 60.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.5e-132 476.5 680 45.0
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.5e-130 470.3 555 53.2
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.5e-127 461.1 494 55.7
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.7e-126 456.4 522 53.4
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.9e-122 444.1 689 41.8
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.2e-118 430.6 677 41.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.7e-118 429.9 719 40.5
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 3.8e-115 419.9 667 43.2
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.0e-111 407.5 680 40.9
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 7.8e-108 395.6 691 38.6
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 2.1e-105 387.5 508 50.0
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.1e-101 375.2 683 37.9
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 6.6e-99 365.9 476 51.7
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 8.1e-97 359.0 444 50.9
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 2.3e-96 357.5 673 38.2
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.5e-95 354.8 523 44.4
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.4e-85 320.9 329 63.8
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.5e-82 310.8 836 31.8
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 9.6e-74 282.3 525 37.3
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.8e-72 278.1 216 67.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 7.4e-58 229.6 216 58.3
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 2.1e-57 228.0 286 55.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 1.1e-56 225.7 165 72.1
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.8e-56 224.9 348 47.7
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.9e-51 207.2 150 73.3
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.1e-50 205.7 820 26.3
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.7e-49 200.7 153 67.3
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.4e-48 198.7 219 52.1
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 6.5e-46 189.9 764 27.1
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.3e-38 165.6 200 50.5
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 2.5e-34 151.4 327 36.4
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 8.5e-30 136.3 204 43.6
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.5e-26 125.6 101 62.4
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 7.7e-23 113.2 78 71.8
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.7e-19 100.1 91 64.8
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.7e-19 100.1 94 61.7
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 9.7e-18 96.3 90 64.4
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 8.0e-12 76.6 84 51.2
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 5.2e-11 73.9 52 65.4
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.7e-09 68.9 47 70.2
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.7e-09 67.8 117 39.3
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 3.1e-08 64.7 91 39.6
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 3.5e-07 61.2 92 46.7


User provided reference genes

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