Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0126600 Rhododendron simsii HOM05D008710 ORTHO05D010926 2.3e-226 788.5 373 100.0
vmacro01737 Vaccinium macrocarpon HOM05D008710 ORTHO05D010926 1.5e-206 722.6 373 91.2
Actinidia39019 Actinidia chinensis HOM05D008710 ORTHO05D010926 3.0e-186 655.2 373 83.1
Hma1.2p1_1928F.1_g307840 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 1.9e-164 582.8 373 73.2
Hma1.2p1_2522F.1_g323850 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 1.2e-163 580.1 373 72.9
Hma1.2p1_1108F.1_g257800 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 4.3e-161 571.6 375 71.7
Nitab4.5_0002039g0010 Nicotiana tabacum HOM05D008710 ORTHO05D010926 5.3e-159 564.7 372 70.2
Nitab4.5_0002453g0020 Nicotiana tabacum HOM05D008710 ORTHO05D010926 2.0e-158 562.8 372 70.2
Peaxi162Scf00152g00154 Petunia axillaris HOM05D008710 ORTHO05D010926 1.4e-156 556.6 372 70.2
Lsat_1_v5_gn_5_105860 Lactuca sativa HOM05D008710 ORTHO05D010926 5.5e-156 554.7 382 70.9
PGSC0003DMG400003483 Solanum tuberosum HOM05D008710 ORTHO05D010926 9.4e-156 553.9 358 71.8
CAN.G16.17 Capsicum annuum HOM05D008710 ORTHO05D010926 1.6e-155 553.1 372 69.4
Sopen11g020080 Solanum pennellii HOM05D008710 ORTHO05D010926 3.6e-155 552.0 372 68.8
DCAR_006688 Daucus carota HOM05D008710 ORTHO05D010926 1.4e-154 550.1 372 70.7
MSTRG.27850 Avicennia marina HOM05D008710 ORTHO05D010926 3.9e-154 548.5 373 68.6
Oeu064619.1 Olea europaea HOM05D008710 ORTHO05D010926 2.6e-153 545.8 370 68.6
Solyc11g044510.3 Solanum lycopersicum HOM05D008710 ORTHO05D010926 3.7e-152 542.0 358 70.1
Oeu049832.1 Olea europaea HOM05D008710 ORTHO05D010926 1.1e-151 540.4 371 68.5
Migut.N01053 Erythranthe guttata HOM05D008710 ORTHO05D010926 1.7e-149 533.1 380 68.4
SalBow8G0453 Salvia bowleyana HOM05D008710 ORTHO05D010926 2.2e-149 532.7 373 66.8
Oeu000123.1 Olea europaea HOM05D008710 ORTHO05D010926 2.9e-149 532.3 373 67.3
Migut.B00808 Erythranthe guttata HOM05D008710 ORTHO05D010926 1.6e-147 526.6 375 66.7
DCAR_025350 Daucus carota HOM05D008710 ORTHO05D010926 5.2e-146 521.5 372 66.7
ECA236G3360 Erigeron canadensis HOM05D008710 ORTHO05D010926 9.7e-145 517.3 394 65.2
SalBow3G1941 Salvia bowleyana HOM05D008710 ORTHO05D010926 2.8e-144 515.8 374 64.7
Cc02_g22850 Coffea canephora HOM05D008710 ORTHO05D010926 4.8e-144 515.0 353 69.1
Dinv19391 Davidia involucrata HOM05D000315 ORTHO05D010926 1.4e-143 513.5 334 74.9
Oeu036673.1 Olea europaea HOM05D008710 ORTHO05D010926 7.7e-142 507.7 373 65.7
unitig_22.g6109 Utricularia gibba HOM05D008710 ORTHO05D010926 2.5e-140 502.7 373 63.5
DCAR_029263 Daucus carota HOM05D008710 ORTHO05D010926 1.8e-138 496.5 358 67.3
SGA_v2.0_scaffold42G15925 Striga asiatica HOM05D008710 ORTHO05D010926 1.8e-138 496.5 397 62.2
SGA_v2.0_scaffold338G49222 Striga asiatica HOM05D008710 ORTHO05D010926 3.7e-136 488.8 367 64.0
unitig_699.g19855 Utricularia gibba HOM05D008710 ORTHO05D010926 1.6e-123 446.8 324 63.9
HanXRQChr10g0294711 Helianthus annuus HOM05D008710 ORTHO05D010926 1.4e-119 433.7 334 63.5
Actinidia00191 Actinidia chinensis HOM05D008710 ORTHO05D010926 4.4e-113 412.1 309 67.6
CSS0018073 Camellia sinensis var. sinensis HOM05D008710 ORTHO05D010926 3.2e-111 406.0 251 78.5
HanXRQChr16g0513641 Helianthus annuus HOM05D008710 ORTHO05D010926 6.0e-102 375.2 309 61.8
ECA234G2276 Erigeron canadensis HOM05D008710 ORTHO05D010926 4.3e-100 369.0 263 70.7
SGA_v2.0_scaffold92G28302 Striga asiatica HOM05D008710 ORTHO05D010926 3.3e-84 316.2 261 58.6
HanXRQChr10g0294591 Helianthus annuus HOM05D008710 ORTHO05D010926 4.5e-73 279.3 233 60.9
HanXRQChr10g0294561 Helianthus annuus HOM05D008710 ORTHO05D010926 1.5e-68 264.2 176 72.2
Rhsim08G0193600 Rhododendron simsii HOM05D008710 ORTHO05D010926 1.5e-15 88.2 119 35.3
Migut.N02448 Erythranthe guttata HOM05D001713 ORTHO05D001669 4.1e-10 70.1 100 42.0
CARHR072160 Cardamine hirsuta HOM05D001713 ORTHO05D001669 5.9e-09 66.2 115 40.9
Migut.N02454 Erythranthe guttata HOM05D001713 ORTHO05D001669 1.9e-07 61.2 107 40.2
BraA01t04478Z Brassica rapa HOM05D001713 ORTHO05D001669 4.2e-07 60.1 120 34.2
Nn4g26398 Nelumbo nucifera HOM05D001713 ORTHO05D001669 7.2e-07 59.3 129 33.3
Eucgr.E01937 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.5e-07 58.9 110 35.5
BcaB04g21444 Brassica carinata HOM05D001713 ORTHO05D001669 1.6e-06 58.2 108 36.1
Potri.016G036116 Populus trichocarpa HOM05D008710 ORTHO05D010926 6.1e-06 56.2 103 32.0
Carub.0003s0487 Capsella rubella HOM05D001713 ORTHO05D001669 8.0e-06 55.8 114 36.0


User provided reference genes

Program Settings