Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 0.0e+00 1380.2 746 100.0
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 0.0e+00 1093.6 747 80.6
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 0.0e+00 1076.2 836 75.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.9e-301 1038.9 747 76.6
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 7.3e-301 1036.9 747 77.5
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.2e-273 945.7 753 69.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 2.9e-273 945.3 754 70.3
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 6.0e-271 937.6 728 72.5
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 7.9e-271 937.2 757 70.1
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.0e-270 936.8 751 70.3
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 4.8e-268 927.9 754 69.4
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.6e-263 912.9 752 69.0
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 1.0e-262 910.2 752 68.0
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.1e-261 906.7 755 68.3
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.3e-261 905.2 750 67.3
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.4e-259 899.8 751 68.3
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.4e-259 899.8 773 67.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 9.0e-259 897.1 752 67.6
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.0e-258 896.0 838 62.6
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.3e-257 893.3 748 68.6
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 2.2e-257 892.5 753 68.1
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 9.3e-256 887.1 747 66.1
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.2e-255 886.7 752 67.7
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 2.7e-255 885.6 754 67.1
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 3.9e-254 881.7 724 67.7
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 4.3e-253 878.2 761 65.2
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 5.7e-253 877.9 756 66.3
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 1.8e-251 872.8 758 65.8
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.4e-251 872.5 756 67.3
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 5.3e-251 871.3 757 66.6
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 9.0e-251 870.5 754 65.8
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.0e-250 869.4 756 66.9
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.3e-249 866.7 756 65.6
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 5.0e-249 864.8 757 66.1
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 9.4e-248 860.5 755 65.7
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.2e-247 860.1 762 64.7
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 5.7e-245 851.3 720 66.2
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 8.2e-244 847.4 748 64.7
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 2.4e-243 845.9 701 68.5
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 4.1e-243 845.1 757 65.4
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 6.9e-243 844.3 753 64.1
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 9.1e-243 844.0 755 64.8
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 9.1e-243 844.0 750 64.3
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.0e-242 842.8 733 65.2
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 2.0e-242 842.8 755 62.5
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 3.4e-242 842.0 741 64.8
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 4.5e-242 841.6 752 62.2
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.0e-241 840.5 752 62.1
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 5.5e-240 834.7 753 63.2
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.2e-239 833.6 749 62.2
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 2.1e-239 832.8 726 66.8
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.6e-239 832.0 756 62.7
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.0e-238 828.9 754 63.7
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.9e-238 828.6 751 61.9
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.1e-237 827.0 747 63.7
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.5e-237 826.6 750 62.1
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 2.0e-237 826.2 749 63.8
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.3e-236 823.5 754 61.0
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.8e-236 821.6 751 62.6
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.4e-235 820.1 754 61.4
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 4.1e-235 818.5 749 62.9
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 4.5e-234 815.1 753 60.7
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.7e-233 813.1 748 62.0
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 1.1e-232 810.4 750 61.2
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 1.6e-231 806.6 752 62.1
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 5.7e-229 798.1 754 61.5
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 7.4e-229 797.7 823 59.3
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 1.3e-228 797.0 753 61.8
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.8e-228 795.8 717 62.8
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 3.7e-228 795.4 767 60.5
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.1e-227 793.9 722 63.3
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 9.1e-227 790.8 749 60.2
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.0e-225 787.3 750 60.1
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.0e-225 787.3 750 60.1
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 2.0e-221 773.1 719 63.0
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.4e-219 766.9 747 58.9
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.0e-218 763.1 751 59.0
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.7e-217 760.0 749 61.7
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.2e-217 759.6 755 61.7
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.9e-216 756.5 754 60.3
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.0e-215 751.1 685 63.9
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 9.5e-208 727.6 702 60.1
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.8e-207 726.1 749 57.3
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 7.5e-205 718.0 724 58.7
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 8.6e-201 704.5 751 55.3
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 5.8e-197 691.8 803 52.4
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 4.1e-195 685.6 674 59.5
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.6e-186 657.1 754 52.7
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 9.9e-181 637.9 757 50.9
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 7.1e-171 605.1 748 50.5
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.1e-168 597.8 627 58.5
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 2.2e-164 583.6 576 58.9
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.4e-155 553.5 549 59.6
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.9e-144 517.3 359 77.7
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.8e-142 510.8 452 66.4
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.9e-139 500.7 363 75.5
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 8.2e-135 485.3 608 52.0
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 7.7e-133 478.8 454 63.0
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 3.1e-126 456.8 299 80.3
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 5.0e-116 422.9 282 80.1
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 1.4e-110 404.8 401 59.6
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.1e-94 352.1 727 35.2
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.7e-87 327.0 347 57.9
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.2e-80 305.4 473 44.8
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 1.7e-79 301.6 696 31.3
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 2.4e-78 297.7 531 43.3
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.2e-77 295.4 272 61.8
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 2.7e-77 294.3 714 36.3
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 4.6e-77 293.5 760 32.8
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 4.3e-75 287.0 400 48.2
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.5e-67 261.9 736 29.3
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.3e-65 254.6 772 28.4
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.3e-35 154.5 135 64.4
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.3e-26 125.9 502 25.5
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-26 125.9 84 70.2
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 9.0e-25 119.8 188 48.4
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-23 115.9 109 56.9
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 5.0e-23 114.0 100 67.0
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 6.1e-21 107.1 121 51.2
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.8e-17 95.5 105 56.2
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.1e-17 94.7 124 42.7
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 4.1e-17 94.4 94 57.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.7e-16 90.1 55 85.5
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 6.5e-15 87.0 118 42.4
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.1e-14 86.3 105 47.6
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.5e-14 85.1 227 31.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.6e-13 80.9 68 61.8
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.0e-12 79.7 70 60.0
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.0e-12 79.7 183 32.8
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.3e-10 72.8 55 67.3
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.5e-08 65.9 41 82.9
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 2.9e-07 61.6 41 63.4


User provided reference genes

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