Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0116300 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.5e-35 152.1 70 100.0
Rhsim11G0115900 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.3e-29 132.5 63 93.7
Rhsim04G0211700 Rhododendron simsii HOM05D008858 ORTHO05D000952 4.8e-29 130.6 63 90.5
Rhsim11G0116000 Rhododendron simsii HOM05D008858 ORTHO05D000952 4.8e-29 130.6 63 90.5
Rhsim04G0211600 Rhododendron simsii HOM05D008858 ORTHO05D000952 6.3e-29 130.2 63 88.9
Rhsim11G0116500 Rhododendron simsii HOM05D008858 ORTHO05D000952 6.3e-29 130.2 63 88.9
Rhsim04G0211800 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.8e-28 128.6 63 88.9
Rhsim11G0115700 Rhododendron simsii HOM05D008858 ORTHO05D000952 3.1e-28 127.9 63 88.9
Rhsim11G0115500 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.1e-22 109.4 63 77.8
Rhsim11G0117000 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.7e-21 105.5 63 77.8
Rhsim11G0116700 Rhododendron simsii HOM05D008858 ORTHO05D000952 6.3e-21 103.6 59 79.7
Rhsim11G0115800 Rhododendron simsii HOM05D008858 ORTHO05D000952 2.4e-20 101.7 62 75.8
Rhsim02G0204500 Rhododendron simsii HOM05D008858 ORTHO05D000952 6.1e-16 87.0 61 67.2
Rhsim02G0204400 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.4e-15 85.9 62 64.5
Rhsim04G0194200 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.4e-15 85.9 54 63.0
Rhsim02G0203800 Rhododendron simsii HOM05D008858 ORTHO05D000952 6.7e-15 83.6 59 64.4
Rhsim05G0100500 Rhododendron simsii HOM05D008858 ORTHO05D000952 8.8e-15 83.2 59 62.7
Rhsim04G0194100 Rhododendron simsii HOM05D008858 ORTHO05D000952 2.6e-14 81.6 54 61.1
Rhsim02G0204100 Rhododendron simsii HOM05D008858 ORTHO05D000952 5.7e-14 80.5 58 60.3
Rhsim02G0204700 Rhododendron simsii HOM05D008858 ORTHO05D000952 5.7e-14 80.5 58 60.3
vmacro15558 Vaccinium macrocarpon HOM05D008858 ORTHO05D000952 2.2e-13 78.6 60 56.7
RhsimUnG0091600 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.3e-10 69.3 68 51.5
Oeu026516.1 Olea europaea HOM05D013612 ORTHO05D000952 5.0e-10 67.4 59 45.8
Dinv02607 Davidia involucrata HOM05D008858 ORTHO05D000952 8.5e-10 66.6 57 52.6
Oeu022191.1 Olea europaea HOM05D008858 ORTHO05D000952 1.1e-09 66.2 62 50.0
Rhsim02G0204000 Rhododendron simsii HOM05D008858 ORTHO05D000952 2.5e-09 65.1 51 60.8
Thecc.06G226600 Theobroma cacao HOM05D000010 ORTHO05D000952 3.2e-09 64.7 51 54.9
Dinv02608 Davidia involucrata HOM05D008858 ORTHO05D000952 4.2e-09 64.3 55 54.5
Rhsim10G0150600 Rhododendron simsii HOM05D008858 ORTHO05D000952 5.5e-09 63.9 44 65.9
Oeu022188.1 Olea europaea HOM05D008858 ORTHO05D000952 1.6e-08 62.4 62 46.8
Rhsim02G0204300 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.6e-08 62.4 51 60.8
Oeu006191.1 Olea europaea HOM05D013612 ORTHO05D000952 4.7e-08 60.8 59 45.8
Oeu006192.1 Olea europaea HOM05D013612 ORTHO05D000952 4.7e-08 60.8 59 45.8
Thecc.08G172400 Theobroma cacao HOM05D000010 ORTHO05D000952 6.1e-08 60.5 51 52.9
Duzib235G1304 Durio zibethinus HOM05D000010 ORTHO05D000952 8.0e-08 60.1 51 51.0
Gohir.D06G215300 Gossypium hirsutum HOM05D000010 ORTHO05D000952 8.0e-08 60.1 51 52.9
Gorai.010G251100 Gossypium raimondii HOM05D000010 ORTHO05D000952 8.0e-08 60.1 51 52.9
Thecc.08G174900 Theobroma cacao HOM05D000010 ORTHO05D000952 8.0e-08 60.1 56 46.4
Gohir.A06G206200 Gossypium hirsutum HOM05D000010 ORTHO05D000952 1.0e-07 59.7 51 51.0
Oeu003424.1 Olea europaea HOM05D013612 ORTHO05D000952 1.4e-07 59.3 59 45.8
Thecc.05G051100 Theobroma cacao HOM05D000010 ORTHO05D000952 1.4e-07 59.3 55 50.9
Dinv02609 Davidia involucrata HOM05D008858 ORTHO05D000952 3.0e-07 58.2 52 51.9
Gohir.A06G206300 Gossypium hirsutum HOM05D000010 ORTHO05D000952 3.0e-07 58.2 51 49.0
Thecc.08G175600 Theobroma cacao HOM05D031203 ORTHO05D000952 3.0e-07 58.2 56 46.4
Thecc.08G172000 Theobroma cacao HOM05D000010 ORTHO05D000952 8.8e-07 56.6 56 46.4
COL.COLO4_17132 Corchorus olitorius HOM05D012661 ORTHO05D000952 1.2e-06 56.2 56 44.6
COL.COLO4_29447 Corchorus olitorius HOM05D013935 ORTHO05D000952 1.5e-06 55.8 55 45.5
COL.COLO4_33212 Corchorus olitorius HOM05D013935 ORTHO05D000952 1.5e-06 55.8 56 44.6
COL.COLO4_29104 Corchorus olitorius HOM05D013935 ORTHO05D000952 2.6e-06 55.1 56 42.9
Dinv31406 Davidia involucrata HOM05D000010 ORTHO05D000952 2.6e-06 55.1 55 43.6
Duzib212G0444 Durio zibethinus HOM05D010810 ORTHO05D000952 2.6e-06 55.1 56 44.6
COL.COLO4_26394 Corchorus olitorius HOM05D012661 ORTHO05D000952 5.7e-06 53.9 56 42.9
Oeu006193.1 Olea europaea HOM05D013612 ORTHO05D000952 5.7e-06 53.9 58 41.4
COL.COLO4_28003 Corchorus olitorius HOM05D012661 ORTHO05D000952 7.5e-06 53.5 56 42.9
COL.COLO4_29713 Corchorus olitorius HOM05D013935 ORTHO05D000952 7.5e-06 53.5 56 42.9
COL.COLO4_06717 Corchorus olitorius HOM05D012661 ORTHO05D000952 9.7e-06 53.1 55 43.6
Duzib212G0912 Durio zibethinus HOM05D010810 ORTHO05D000952 9.7e-06 53.1 56 42.9
Gohir.D10G225766 Gossypium hirsutum HOM05D012661 ORTHO05D000952 9.7e-06 53.1 60 40.0
Gohir.D10G225799 Gossypium hirsutum HOM05D012661 ORTHO05D000952 9.7e-06 53.1 60 40.0
Gohir.D10G225832 Gossypium hirsutum HOM05D012661 ORTHO05D000952 9.7e-06 53.1 60 40.0


User provided reference genes

Program Settings