Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.6e-56 221.1 146 100.0
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.7e-32 140.6 144 77.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-28 129.4 143 65.7
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-26 123.6 147 68.0
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-26 123.6 147 68.0
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.4e-24 114.4 101 66.3
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.1e-22 107.5 84 67.9
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.6e-21 105.9 120 55.0
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.5e-19 99.4 147 57.1
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.7e-18 95.9 80 60.0
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.7e-18 95.1 120 64.2
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-17 93.6 143 46.9
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.3e-17 92.8 116 69.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-17 92.0 88 70.5
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 2.0e-16 89.7 143 57.3
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 5.7e-16 88.2 135 54.8
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.3e-15 87.0 93 79.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.2e-15 86.3 193 46.6
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 3.7e-15 85.5 89 75.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.2e-15 84.3 90 65.6
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.4e-14 83.6 94 74.5
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.4e-14 83.6 85 68.2
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.8e-14 83.2 93 69.9
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.8e-14 83.2 93 69.9
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.4e-14 82.8 85 68.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.4e-14 82.8 93 72.0
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.1e-14 82.4 60 63.3
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.1e-14 80.9 148 54.7
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 9.1e-14 80.9 87 71.3
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 9.1e-14 80.9 101 52.5
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-13 79.0 149 53.0
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.5e-13 78.6 129 57.4
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.5e-13 78.6 47 74.5
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 7.7e-13 77.8 144 54.2
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 7.7e-13 77.8 85 70.6
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 7.7e-13 77.8 91 70.3
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.0e-12 77.4 92 70.7
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.0e-12 77.4 85 61.2
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.0e-12 77.4 88 65.9
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.2e-12 76.3 87 72.4
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.8e-12 75.5 94 71.3
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.8e-12 75.5 85 71.8
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 8.5e-12 74.3 193 44.0
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 1.9e-11 73.2 101 42.6
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.5e-11 72.8 57 66.7
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-11 72.8 67 55.2
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-11 72.8 48 68.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.2e-11 72.4 73 49.3
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 4.2e-11 72.0 72 51.4
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 4.2e-11 72.0 87 62.1
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.5e-11 71.6 48 72.9
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.5e-11 71.6 145 52.4
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.5e-11 71.6 93 69.9
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.2e-11 71.2 118 60.2
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.2e-11 71.2 118 60.2
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 9.4e-11 70.9 88 52.3
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-10 70.1 93 71.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 2.1e-10 69.7 84 73.8
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.1e-10 69.7 93 68.8
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.6e-10 68.9 79 72.2
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-10 68.6 82 58.5
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-10 68.6 85 67.1
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 4.7e-10 68.6 85 67.1
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 4.7e-10 68.6 85 72.9
ATR0820G076 Amborella trichopoda HOM05D002879 ORTHO05D002930 6.1e-10 68.2 121 51.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.1e-10 68.2 139 52.5
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.0e-10 67.8 42 69.0
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.0e-10 67.8 88 59.1
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.0e-09 67.4 95 64.2
AUR62040592 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-09 67.4 122 56.6
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.0e-09 67.4 85 71.8
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-09 67.0 48 62.5
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-09 67.0 103 55.3
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-09 67.0 48 62.5
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.4e-09 67.0 43 67.4
Rhsim11G0085200 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-09 67.0 98 43.9
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-09 66.6 98 64.3
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 1.8e-09 66.6 144 45.1
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.3e-09 66.2 48 64.6
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-09 66.2 43 72.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-09 65.9 93 59.1
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.0e-09 65.9 75 65.3
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.0e-09 65.9 101 40.6
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 5.2e-09 65.1 98 63.3
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 5.2e-09 65.1 123 51.2
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.2e-09 65.1 82 61.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.2e-09 65.1 43 67.4
COL.COLO4_29858 Corchorus olitorius HOM05D002879 ORTHO05D002930 6.7e-09 64.7 143 57.3
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 6.7e-09 64.7 193 42.0
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 6.7e-09 64.7 61 45.9
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 8.8e-09 64.3 43 69.8
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 8.8e-09 64.3 121 58.7
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.2e-08 63.9 48 60.4
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.2e-08 63.9 147 38.1
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.2e-08 63.9 100 37.0
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-08 63.2 43 69.8
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-08 63.2 93 59.1
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.6e-08 62.8 85 65.9
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 3.3e-08 62.4 85 71.8
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 4.4e-08 62.0 93 50.5
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 4.4e-08 62.0 90 61.1
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 5.7e-08 61.6 143 54.5
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 7.5e-08 61.2 42 66.7
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 7.5e-08 61.2 44 59.1
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.7e-08 60.8 80 72.5
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 9.7e-08 60.8 47 53.2
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 9.7e-08 60.8 190 37.4
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.7e-08 60.8 81 71.6
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.3e-07 60.5 89 66.3
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.3e-07 60.5 89 52.8
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-07 60.5 75 45.3
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.3e-07 60.5 87 41.4
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 1.7e-07 60.1 89 65.2
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-07 60.1 92 41.3
SalBow7G0277 Salvia bowleyana HOM05D058840 ORTHO05D002930 2.2e-07 59.7 123 52.8
SalBow7G2213 Salvia bowleyana HOM05D058840 ORTHO05D002930 2.2e-07 59.7 123 52.8
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.2e-07 59.7 38 71.1
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-07 59.3 43 60.5
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-07 59.3 80 66.2
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.8e-07 59.3 52 61.5
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-07 59.3 48 60.4
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 3.7e-07 58.9 92 62.0
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.7e-07 58.9 87 39.1
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.7e-07 58.9 90 68.9
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.7e-07 58.9 85 71.8
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 4.8e-07 58.5 68 72.1
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 4.8e-07 58.5 90 61.1
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.8e-07 58.5 123 38.2
Actinidia10641 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.2e-07 57.8 109 60.6
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-06 57.4 74 44.6
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-06 57.4 74 44.6
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.4e-06 57.0 147 44.2
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.4e-06 57.0 90 67.8
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-06 56.6 89 64.0
Cfa018311 Carpinus fangiana HOM05D066527 ORTHO05D002930 1.8e-06 56.6 119 33.6
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.8e-06 56.6 47 55.3
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-06 55.5 46 56.5
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-06 55.5 46 56.5
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-06 55.5 46 56.5
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.3e-06 55.1 71 45.1
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 5.3e-06 55.1 41 56.1
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 7.0e-06 54.7 92 65.2
TAR381G0478 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.0e-06 54.7 77 37.7
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 7.0e-06 54.7 110 59.1
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.1e-06 54.3 46 56.5
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.1e-06 54.3 97 52.6
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 9.1e-06 54.3 85 64.7


User provided reference genes

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