Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.3e-35 152.1 83 100.0
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-33 146.0 83 96.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-21 105.5 71 74.6
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.1e-16 90.1 81 55.6
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.5e-15 86.3 72 55.6
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-15 86.3 64 71.9
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.0e-15 85.9 65 69.2
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.6e-15 85.5 65 69.2
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.2e-14 82.4 81 50.6
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 6.5e-14 80.9 73 57.5
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.5e-14 80.9 66 72.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 5.5e-13 77.8 72 52.8
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 7.2e-13 77.4 66 63.6
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.2e-12 76.6 72 50.0
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 4.6e-12 74.7 57 59.6
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 6.1e-12 74.3 66 54.5
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.0e-11 73.6 54 63.0
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.8e-11 72.8 65 53.8
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.8e-11 72.8 52 63.5
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.8e-11 72.8 52 63.5
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-11 72.4 66 59.1
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 6.7e-11 70.9 66 57.6
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.8e-11 70.5 62 54.8
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.3e-10 68.6 64 56.2
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.3e-10 68.6 66 53.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.3e-10 68.2 60 53.3
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.3e-10 68.2 67 47.8
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.7e-10 67.8 61 54.1
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.7e-10 67.8 61 54.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 7.4e-10 67.4 67 53.7
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.4e-10 67.4 49 59.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 7.4e-10 67.4 54 55.6
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.7e-10 67.0 66 56.1
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-09 66.6 49 63.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.3e-09 66.6 51 62.7
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.3e-09 66.6 49 61.2
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.7e-09 66.2 50 62.0
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.7e-09 66.2 71 43.7
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.7e-09 66.2 68 51.5
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-09 66.2 70 47.1
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.2e-09 65.9 67 46.3
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.2e-09 65.9 50 62.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 2.8e-09 65.5 49 59.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.7e-09 65.1 67 46.3
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.7e-09 65.1 49 59.2
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.8e-09 64.7 48 62.5
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 4.8e-09 64.7 83 47.0
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.2e-09 63.9 66 54.5
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 8.2e-09 63.9 48 60.4
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.1e-08 63.5 52 55.8
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-08 63.5 66 54.5
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-08 63.5 66 54.5
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.1e-08 63.5 50 58.0
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.4e-08 63.2 53 49.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.8e-08 62.8 48 58.3
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-08 62.4 50 58.0
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-08 62.4 50 58.0
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.4e-08 62.4 54 53.7
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-08 62.0 66 53.0
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.1e-08 61.6 48 60.4
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.1e-08 61.6 56 57.1
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.1e-08 61.6 66 53.0
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.1e-08 61.6 66 53.0
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 5.3e-08 61.2 51 62.7
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.9e-08 60.8 47 59.6
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.9e-08 60.8 47 59.6
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.9e-08 60.8 48 56.2
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.1e-08 60.5 63 47.6
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 9.1e-08 60.5 66 40.9
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-07 59.7 47 59.6
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.5e-07 59.7 81 40.7
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.5e-07 59.7 52 50.0
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.5e-07 59.7 56 50.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 2.0e-07 59.3 65 52.3
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.0e-07 59.3 70 45.7
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.6e-07 58.9 51 52.9
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.6e-07 58.9 53 49.1
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 2.6e-07 58.9 49 51.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.4e-07 58.5 70 45.7
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.5e-07 58.2 52 55.8
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 4.5e-07 58.2 37 62.2
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 5.9e-07 57.8 44 61.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-06 56.6 47 53.2
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.7e-06 56.2 70 47.1
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 1.7e-06 56.2 78 44.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.2e-06 55.8 46 54.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.2e-06 55.8 56 53.6
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.9e-06 55.5 51 49.0
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 2.9e-06 55.5 74 54.1
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.9e-06 55.5 46 56.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.9e-06 55.5 50 48.0
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.8e-06 55.1 50 48.0
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 3.8e-06 55.1 72 40.3
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.0e-06 54.7 38 65.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 6.5e-06 54.3 51 54.9
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 6.5e-06 54.3 37 62.2
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 6.5e-06 54.3 64 42.2
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 6.5e-06 54.3 46 58.7
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 8.5e-06 53.9 54 57.4
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 8.5e-06 53.9 44 54.5
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.5e-06 53.9 53 52.8


User provided reference genes

Program Settings