Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.8e-34 147.5 107 100.0
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.9e-32 142.5 108 95.4
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.2e-32 141.4 108 94.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.3e-29 131.3 107 75.7
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.8e-17 91.7 109 78.9
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.1e-15 85.9 64 71.9
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.5e-15 85.1 64 71.9
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.1e-14 81.3 67 58.2
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 8.7e-14 80.5 92 73.9
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 8.7e-14 80.5 68 57.4
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-13 79.3 66 56.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 7.4e-13 77.4 98 65.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.6e-13 77.0 90 54.4
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-12 76.6 48 66.7
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.1e-12 75.9 59 55.9
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.2e-12 73.9 66 53.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-11 73.6 91 59.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-11 73.6 91 60.4
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.4e-11 73.2 63 54.0
Rhsim11G0084900 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.8e-11 72.8 114 65.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.3e-11 71.2 94 67.0
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 6.9e-11 70.9 50 60.0
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.9e-11 70.9 93 71.0
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.9e-11 70.9 50 60.0
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.9e-11 70.9 90 64.4
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 6.9e-11 70.9 94 61.7
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.9e-11 70.9 90 64.4
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 6.9e-11 70.9 44 72.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.0e-11 70.5 90 71.1
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.0e-11 70.5 90 67.8
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 1.2e-10 70.1 92 69.6
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.2e-10 70.1 44 70.5
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.2e-10 70.1 88 64.8
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.2e-10 70.1 44 70.5
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.0e-10 69.3 44 65.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.0e-10 69.3 62 54.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 2.6e-10 68.9 89 70.8
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.6e-10 68.9 45 64.4
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.6e-10 68.9 110 60.0
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.6e-10 68.9 44 70.5
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.4e-10 68.6 88 61.4
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.5e-10 68.2 96 66.7
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 5.8e-10 67.8 51 56.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.8e-10 67.8 45 62.2
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 7.6e-10 67.4 44 68.2
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 7.6e-10 67.4 44 68.2
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 7.6e-10 67.4 45 62.2
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 7.6e-10 67.4 89 65.2
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.6e-10 67.4 86 65.1
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-09 67.0 45 62.2
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.0e-09 67.0 100 55.0
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.0e-09 67.0 59 49.2
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.3e-09 66.6 85 68.2
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.7e-09 66.2 101 59.4
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.2e-09 65.9 79 44.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.8e-09 65.1 62 50.0
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 3.8e-09 65.1 90 57.8
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.8e-09 65.1 43 65.1
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.8e-09 65.1 43 65.1
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.5e-09 64.3 79 65.8
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 6.5e-09 64.3 79 65.8
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 6.5e-09 64.3 88 67.0
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 8.4e-09 63.9 44 63.6
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-08 63.5 77 61.0
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-08 63.5 43 65.1
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-08 63.2 43 67.4
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.4e-08 63.2 92 51.1
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.4e-08 63.2 96 65.6
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.4e-08 63.2 100 60.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-08 62.8 43 65.1
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.5e-08 62.4 65 49.2
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.5e-08 62.4 92 48.9
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.5e-08 62.4 50 56.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.5e-08 62.4 88 64.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.2e-08 62.0 90 65.6
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.2e-08 61.6 43 65.1
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.5e-08 61.2 43 62.8
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 7.1e-08 60.8 43 62.8
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.1e-08 60.8 43 65.1
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.1e-08 60.8 43 67.4
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.3e-08 60.5 43 62.8
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.2e-07 60.1 43 65.1
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.6e-07 59.7 89 56.2
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-07 59.7 58 50.0
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-07 59.7 58 50.0
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-07 59.7 58 50.0
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.6e-07 59.7 82 69.5
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.6e-07 59.7 37 70.3
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.1e-07 59.3 43 67.4
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.7e-07 58.9 109 42.2
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 2.7e-07 58.9 43 60.5
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.7e-07 58.9 89 66.3
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 3.5e-07 58.5 92 66.3
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.5e-07 58.5 43 60.5
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.5e-07 58.5 43 60.5
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 4.6e-07 58.2 43 58.1
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.0e-07 57.8 40 67.5
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.0e-07 57.8 40 67.5
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 6.0e-07 57.8 43 58.1
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 7.9e-07 57.4 59 47.5
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 1.0e-06 57.0 68 41.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-06 57.0 74 41.9
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-06 56.6 88 54.5
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.3e-06 56.6 64 50.0
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.8e-06 56.2 43 58.1
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.8e-06 56.2 39 61.5
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-06 56.2 59 50.8
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.3e-06 55.8 39 64.1
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-06 55.5 48 52.1
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-06 55.5 48 52.1
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-06 55.5 48 52.1
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-06 55.5 44 59.1
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.0e-06 55.5 44 59.1
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.0e-06 55.5 44 59.1
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 3.0e-06 55.5 43 58.1
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.9e-06 55.1 87 63.2
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.1e-06 54.7 40 62.5
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.7e-06 54.3 89 66.3
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.7e-06 53.9 65 43.1
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 8.7e-06 53.9 50 52.0


User provided reference genes

Program Settings