Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.3e-34 149.1 69 100.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.8e-13 78.2 65 60.0
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 6.2e-13 77.0 62 64.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 6.2e-13 77.0 62 61.3
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 8.1e-13 76.6 65 58.5
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 8.1e-13 76.6 65 58.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.1e-12 76.3 61 63.9
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.1e-12 76.3 61 60.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.4e-12 75.9 62 62.9
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.4e-12 75.9 62 61.3
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.8e-12 75.5 62 61.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.8e-12 75.5 62 61.3
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.8e-12 75.5 61 65.6
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.4e-12 75.1 65 56.9
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.4e-12 75.1 65 56.9
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.4e-12 75.1 65 56.9
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.4e-12 75.1 65 55.4
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 2.4e-12 75.1 62 61.3
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.4e-12 75.1 62 61.3
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.4e-12 75.1 62 61.3
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.4e-12 75.1 62 61.3
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.4e-12 75.1 62 61.3
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 3.1e-12 74.7 62 59.7
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 4.0e-12 74.3 62 59.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.0e-12 74.3 62 59.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 4.0e-12 74.3 65 55.4
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 4.0e-12 74.3 62 59.7
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 4.0e-12 74.3 62 59.7
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 5.3e-12 73.9 62 59.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 5.3e-12 73.9 61 57.4
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 5.3e-12 73.9 61 57.4
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 6.9e-12 73.6 62 59.7
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 9.0e-12 73.2 61 59.0
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 9.0e-12 73.2 61 60.7
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 9.0e-12 73.2 61 59.0
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 9.0e-12 73.2 62 59.7
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.2e-11 72.8 62 58.1
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.2e-11 72.8 62 58.1
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 2.0e-11 72.0 62 56.5
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.0e-11 72.0 62 56.5
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 2.0e-11 72.0 61 59.0
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.6e-11 71.6 65 53.8
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.6e-11 71.6 62 58.1
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.6e-11 71.6 62 58.1
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 3.4e-11 71.2 59 59.3
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.4e-11 71.2 61 59.0
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 4.5e-11 70.9 61 55.7
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 4.5e-11 70.9 61 57.4
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 7.6e-11 70.1 61 57.4
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 7.6e-11 70.1 62 53.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 9.9e-11 69.7 64 54.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 9.9e-11 69.7 61 59.0
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 9.9e-11 69.7 61 59.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.3e-10 69.3 61 57.4
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.3e-10 69.3 62 56.5
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.3e-10 69.3 62 56.5
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.3e-10 69.3 63 58.7
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.3e-10 69.3 61 57.4
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.7e-10 68.9 61 55.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.7e-10 68.9 61 54.1
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 2.2e-10 68.6 60 56.7
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.2e-10 68.6 60 50.0
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 2.9e-10 68.2 62 56.5
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 3.8e-10 67.8 61 57.4
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.8e-10 67.8 59 54.2
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 3.8e-10 67.8 61 55.7
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 3.8e-10 67.8 58 56.9
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.4e-10 67.0 61 54.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 8.4e-10 66.6 61 55.7
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 8.4e-10 66.6 61 55.7
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 8.4e-10 66.6 61 54.1
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-09 66.2 61 54.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.1e-09 66.2 62 54.8
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.4e-09 65.9 61 54.1
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.4e-09 65.9 61 54.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.4e-09 65.9 61 54.1
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.4e-09 65.9 62 53.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.4e-09 65.9 61 55.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.4e-09 65.9 61 52.5
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.9e-09 65.5 61 52.5
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.9e-09 65.5 61 52.5
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 2.4e-09 65.1 61 52.5
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.2e-09 64.7 61 52.5
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.2e-09 64.3 62 50.0
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.2e-09 64.3 62 50.0
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 4.2e-09 64.3 61 49.2
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.2e-09 64.3 61 50.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 7.1e-09 63.5 61 54.1
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 1.6e-08 62.4 60 50.0
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.7e-08 61.6 74 47.3
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 6.0e-08 60.5 77 45.5
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 6.0e-08 60.5 77 45.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 6.0e-08 60.5 58 51.7
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 7.9e-08 60.1 60 51.7
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.3e-07 58.5 54 53.7
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 8.7e-07 56.6 60 43.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 4.3e-06 54.3 62 46.8
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 5.6e-06 53.9 51 51.0


User provided reference genes

Program Settings