Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.8e-105 386.0 197 100.0
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.8e-63 245.4 151 84.1
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.4e-20 104.0 162 45.7
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 4.4e-19 99.0 161 41.6
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 3.7e-18 95.9 160 43.8
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 4.8e-18 95.5 138 47.8
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 8.2e-18 94.7 136 46.3
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 9.1e-17 91.3 175 41.7
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.2e-16 90.9 109 49.5
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.5e-16 90.5 145 42.8
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.5e-16 90.5 124 47.6
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.1e-14 84.3 132 40.9
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.6e-13 80.5 130 41.5
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.6e-13 80.5 132 39.4
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 1.6e-13 80.5 124 43.5
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 2.1e-13 80.1 166 37.3
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.1e-13 80.1 106 44.3
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.1e-13 80.1 151 39.7
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.7e-13 79.7 146 39.0
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 4.7e-13 79.0 173 39.3
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.7e-13 79.0 91 45.1
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 4.7e-13 79.0 102 45.1
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 8.0e-13 78.2 120 48.3
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 8.0e-13 78.2 132 38.6
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 1.0e-12 77.8 137 43.1
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.4e-12 77.4 130 40.8
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 1.4e-12 77.4 119 44.5
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 1.8e-12 77.0 138 38.4
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.3e-12 76.6 90 51.1
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 3.0e-12 76.3 124 44.4
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 3.9e-12 75.9 142 38.0
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 3.9e-12 75.9 89 49.4
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 3.9e-12 75.9 143 39.2
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.2e-12 75.5 131 42.0
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 5.2e-12 75.5 110 43.6
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 6.7e-12 75.1 97 45.4
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.1e-11 74.3 118 44.1
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.1e-11 74.3 144 39.6
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 2.6e-11 73.2 116 44.0
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.3e-11 72.8 125 43.2
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.3e-11 72.8 96 50.0
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 4.4e-11 72.4 128 42.2
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 5.7e-11 72.0 105 41.0
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 7.4e-11 71.6 109 43.1
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.7e-10 70.5 103 43.7
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.7e-10 70.5 105 43.8
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.2e-10 70.1 162 38.3
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 2.8e-10 69.7 147 36.1
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 2.8e-10 69.7 131 41.2
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 2.8e-10 69.7 104 45.2
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 2.8e-10 69.7 93 44.1
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.7e-10 69.3 137 38.0
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 6.3e-10 68.6 129 38.0
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 8.2e-10 68.2 115 42.6
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 8.2e-10 68.2 108 40.7
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 8.2e-10 68.2 112 40.2
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 1.1e-09 67.8 155 38.1
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 1.8e-09 67.0 123 40.7
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.4e-09 66.6 121 40.5
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 2.4e-09 66.6 118 41.5
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 2.4e-09 66.6 140 37.1
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 3.1e-09 66.2 138 37.7
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 4.1e-09 65.9 116 38.8
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 4.1e-09 65.9 141 34.8
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 5.3e-09 65.5 93 43.0
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 5.3e-09 65.5 78 48.7
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 9.1e-09 64.7 126 39.7
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 9.1e-09 64.7 144 38.2
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 9.1e-09 64.7 112 42.0
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 1.2e-08 64.3 93 45.2
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.2e-08 64.3 93 45.2
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.2e-08 64.3 80 45.0
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 1.6e-08 63.9 100 42.0
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.0e-08 63.5 75 53.3
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 2.0e-08 63.5 131 38.2
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 3.5e-08 62.8 155 37.4
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.5e-08 62.8 137 36.5
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 4.5e-08 62.4 98 36.7
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 4.5e-08 62.4 148 33.8
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 1.0e-07 61.2 92 42.4
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.0e-07 61.2 127 38.6
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.0e-07 61.2 127 38.6
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 1.0e-07 61.2 143 35.0
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.3e-07 60.8 97 38.1
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 1.3e-07 60.8 120 35.0
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.3e-07 60.8 133 36.1
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 1.7e-07 60.5 92 43.5
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 1.7e-07 60.5 104 39.4
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.7e-07 60.5 115 40.9
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 1.7e-07 60.5 115 36.5
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 2.2e-07 60.1 115 38.3
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 2.2e-07 60.1 133 38.3
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 2.9e-07 59.7 92 41.3
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 2.9e-07 59.7 126 37.3
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.9e-07 59.7 76 46.1
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.8e-07 59.3 76 46.1
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 3.8e-07 59.3 94 42.6
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 5.0e-07 58.9 92 38.0
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 5.0e-07 58.9 116 39.7
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 5.0e-07 58.9 116 39.7
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 5.0e-07 58.9 93 43.0
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 5.0e-07 58.9 107 41.1
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.5e-06 57.4 120 37.5
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.5e-06 57.4 134 35.1
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.9e-06 57.0 94 41.5
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 1.9e-06 57.0 93 38.7
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.9e-06 57.0 92 38.0
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 2.5e-06 56.6 92 37.0
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.5e-06 56.6 66 50.0
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 3.2e-06 56.2 185 30.3
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 4.2e-06 55.8 143 33.6
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 4.2e-06 55.8 106 41.5
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 4.2e-06 55.8 105 38.1
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 4.2e-06 55.8 78 47.4
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 5.5e-06 55.5 111 36.0
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 9.4e-06 54.7 189 33.3


User provided reference genes

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