Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 8.8e-262 906.4 440 100.0
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.0e-238 829.7 441 90.5
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 3.3e-216 755.0 440 83.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.3e-214 748.8 441 81.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.4e-198 696.4 441 77.6
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 4.4e-189 664.8 438 72.6
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.4e-182 642.5 439 71.3
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 4.0e-182 641.7 440 72.5
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 8.4e-180 634.0 448 70.3
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 7.1e-179 630.9 438 69.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.0e-178 627.9 441 69.2
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 6.0e-178 627.9 443 70.2
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.8e-177 626.3 441 69.4
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.0e-177 625.5 442 68.8
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-176 623.6 441 68.5
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 9.6e-176 620.5 438 68.7
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.1e-175 619.4 439 68.8
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.1e-175 619.4 441 68.0
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 8.1e-175 617.5 438 67.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.4e-174 616.7 444 68.0
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.2e-173 613.6 440 70.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.2e-173 613.6 438 66.7
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.5e-173 613.2 438 67.8
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.5e-173 613.2 449 68.2
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 4.5e-173 611.7 438 66.4
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 7.9e-170 600.9 438 69.4
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.8e-169 599.7 442 67.4
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.8e-169 599.7 452 66.2
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.9e-168 596.3 455 67.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 7.4e-168 594.3 439 67.7
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 9.6e-168 594.0 439 68.1
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.1e-167 592.8 440 68.2
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 2.8e-167 592.4 469 64.4
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 3.1e-166 589.0 444 68.2
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.5e-165 586.6 441 67.3
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 2.0e-165 586.3 443 65.7
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.7e-164 583.2 440 66.1
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 3.8e-164 582.0 441 68.0
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.8e-164 582.0 444 66.2
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 8.4e-164 580.9 441 66.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.3e-161 573.5 443 65.9
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 5.1e-161 571.6 441 66.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 6.7e-161 571.2 405 70.4
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.5e-160 569.3 457 63.5
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 3.3e-160 568.9 457 63.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.3e-159 567.0 449 64.6
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.1e-158 563.9 442 65.2
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.1e-158 563.9 447 63.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.2e-157 560.5 459 63.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.7e-157 557.8 441 64.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.3e-156 557.0 450 62.7
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.3e-156 557.0 446 63.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.9e-155 553.1 443 64.6
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.5e-155 552.7 440 65.2
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.6e-154 550.1 443 63.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 3.6e-154 548.9 459 61.7
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 7.9e-154 547.7 443 62.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.0e-153 547.4 443 62.8
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.8e-153 546.6 464 60.1
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 8.8e-153 544.3 443 63.2
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 8.8e-153 544.3 459 60.6
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.0e-152 543.1 419 65.6
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.5e-152 542.7 450 61.8
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.7e-152 540.8 307 81.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.3e-151 540.4 449 61.9
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 2.8e-151 539.3 448 61.6
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 4.8e-151 538.5 445 63.4
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.3e-148 530.4 443 62.3
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.9e-148 529.3 441 61.7
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.9e-147 526.6 446 61.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.9e-147 526.6 499 56.7
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.6e-146 523.5 445 60.4
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 4.7e-146 521.9 522 54.2
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 3.0e-145 519.2 442 60.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.0e-144 516.5 442 59.7
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.3e-144 515.8 302 80.8
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 1.8e-142 510.0 441 59.0
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.1e-142 509.2 328 72.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 3.1e-142 509.2 325 73.5
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.0e-142 508.1 415 61.4
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.6e-141 506.1 440 59.1
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 3.5e-141 505.8 442 58.1
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.3e-140 503.8 470 57.4
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.1e-139 500.7 477 57.2
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 6.1e-138 495.0 452 55.3
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.0e-137 494.2 303 74.9
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.9e-137 492.3 385 66.2
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 4.8e-135 485.3 450 59.3
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 8.8e-129 464.5 369 65.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.4e-120 435.6 295 69.8
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 6.3e-119 431.8 461 51.6
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-116 422.5 338 62.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.1e-114 415.2 230 83.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 5.7e-112 408.7 363 60.3
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 2.8e-111 406.4 443 49.4
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.7e-109 399.8 220 83.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.7e-108 397.1 346 56.6
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.7e-108 397.1 346 56.6
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.9e-108 396.4 345 60.3
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 3.9e-108 396.0 266 70.7
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 3.3e-107 392.9 303 63.0
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.5e-104 384.0 312 60.6
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.4e-104 382.9 410 52.2
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.4e-102 377.5 309 60.2
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 3.9e-100 369.4 357 55.5
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 3.6e-90 336.3 203 78.8
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 8.3e-87 325.1 201 78.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.3e-74 284.6 208 64.9
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.3e-74 284.6 208 64.9
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.4e-72 276.2 269 49.1
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.6e-66 257.7 278 43.9
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 7.4e-59 232.3 120 86.7
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 6.7e-52 209.1 263 48.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 6.2e-50 202.6 196 52.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 5.0e-39 166.4 134 60.4
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 9.4e-38 162.2 126 61.9
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.8e-34 150.6 126 57.9
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.6e-32 144.1 70 91.4
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.2e-30 137.1 78 78.2
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.3e-23 115.2 68 76.5
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.6e-21 107.1 74 63.5
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 4.1e-17 93.6 53 77.4
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.4e-14 82.4 76 51.3
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.1e-13 79.7 129 40.3
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.4e-11 73.6 120 31.7
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 2.2e-10 71.2 107 43.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.7e-07 61.6 59 44.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.2e-06 57.4 41 61.0


User provided reference genes

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