Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 2.1e-64 248.8 122 100.0
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.3e-45 186.4 105 87.6
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 7.6e-14 80.9 85 50.6
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 7.1e-12 74.3 91 50.5
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 7.1e-12 74.3 111 45.0
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.6e-11 73.2 106 46.2
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 2.1e-11 72.8 110 47.3
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 3.5e-11 72.0 102 42.2
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 4.6e-11 71.6 111 43.2
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 6.0e-11 71.2 105 46.7
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 1.0e-10 70.5 109 41.3
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 1.0e-10 70.5 116 44.8
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 2.3e-10 69.3 98 44.9
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 3.9e-10 68.6 122 38.5
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 5.1e-10 68.2 96 49.0
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 6.7e-10 67.8 104 47.1
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 1.5e-09 66.6 71 54.9
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 1.9e-09 66.2 88 45.5
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.9e-09 66.2 97 48.5
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 4.3e-09 65.1 87 46.0
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 5.6e-09 64.7 98 48.0
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 5.6e-09 64.7 99 43.4
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 7.4e-09 64.3 111 40.5
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 7.4e-09 64.3 97 46.4
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 9.6e-09 63.9 113 41.6
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 1.3e-08 63.5 64 60.9
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 1.6e-08 63.2 113 40.7
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 1.6e-08 63.2 113 40.7
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.6e-08 63.2 128 36.7
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 2.1e-08 62.8 87 48.3
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 2.1e-08 62.8 113 40.7
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 2.1e-08 62.8 113 40.7
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 2.1e-08 62.8 83 48.2
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.8e-08 62.4 88 46.6
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 2.8e-08 62.4 88 46.6
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 2.8e-08 62.4 99 41.4
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 2.8e-08 62.4 132 41.7
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 3.7e-08 62.0 114 39.5
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 4.8e-08 61.6 80 50.0
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 4.8e-08 61.6 80 50.0
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 4.8e-08 61.6 100 44.0
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 4.8e-08 61.6 124 37.9
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 6.2e-08 61.2 88 46.6
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 6.2e-08 61.2 108 40.7
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 8.1e-08 60.8 109 41.3
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 8.1e-08 60.8 82 51.2
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.1e-07 60.5 113 39.8
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 1.1e-07 60.5 84 46.4
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 5.3e-07 58.2 124 39.5
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 5.3e-07 58.2 104 40.4
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 6.9e-07 57.8 99 43.4
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.2e-06 57.0 100 44.0
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 2.0e-06 56.2 80 46.2
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 2.6e-06 55.8 95 36.8
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 3.4e-06 55.5 105 41.0
AUR62036925 Chenopodium quinoa HOM05D007960 ORTHO05D010026 7.6e-06 54.3 45 57.8


User provided reference genes

Program Settings