Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0053700 Rhododendron simsii HOM05D004912 ORTHO05D006144 2.2e-80 302.4 169 100.0
Rhsim11G0053200 Rhododendron simsii HOM05D004912 ORTHO05D006144 2.0e-25 119.8 118 61.9
Migut.C01310 Erythranthe guttata HOM05D004912 ORTHO05D006144 2.6e-12 76.3 115 43.5
Haze_21297 Corylus avellana HOM05D004912 ORTHO05D006144 3.4e-12 75.9 150 42.0
TAR628G1727 Trochodendron aralioides HOM05D004912 ORTHO05D006144 3.4e-12 75.9 117 45.3
CSS0047311 Camellia sinensis var. sinensis HOM05D004912 ORTHO05D006144 1.3e-11 73.9 158 38.6
Lj4A484T8 Lonicera japonica HOM05D004912 ORTHO05D006144 2.2e-11 73.2 116 48.3
Nn5g27542 Nelumbo nucifera HOM05D004912 ORTHO05D006144 8.3e-11 71.2 151 39.1
Cfa012942 Carpinus fangiana HOM05D004912 ORTHO05D006144 1.4e-10 70.5 150 40.0
ECA232G1825 Erigeron canadensis HOM05D004912 ORTHO05D006144 2.4e-10 69.7 116 37.1
QL02p026125 Quercus lobata HOM05D004912 ORTHO05D006144 2.4e-10 69.7 148 39.9
Lsat_1_v5_gn_7_21041 Lactuca sativa HOM05D004912 ORTHO05D006144 4.1e-10 68.9 177 33.3
Actinidia01557 Actinidia chinensis HOM05D004912 ORTHO05D006144 5.4e-10 68.6 175 36.6
TWI23G1256 Tripterygium wilfordii HOM05D004912 ORTHO05D006144 9.2e-10 67.8 117 41.9
Eucgr.F04115 Eucalyptus grandis HOM05D004912 ORTHO05D006144 1.2e-09 67.4 170 38.2
Oeu059194.1 Olea europaea HOM05D004912 ORTHO05D006144 1.6e-09 67.0 99 44.4
Atru.chr13.2352 Acer truncatum HOM05D004912 ORTHO05D006144 4.6e-09 65.5 115 43.5
Nitab4.5_0001378g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 4.6e-09 65.5 122 41.8
Sabra13G0093000 Salix brachista HOM05D004912 ORTHO05D006144 4.6e-09 65.5 123 41.5
MBI17_g01791_MAGBIO Magnolia biondii HOM05D004912 ORTHO05D006144 6.0e-09 65.1 144 39.6
Ciclev10001073m.g Citrus clementina HOM05D004912 ORTHO05D006144 7.8e-09 64.7 142 35.9
Nitab4.5_0007332g0020 Nicotiana tabacum HOM05D004912 ORTHO05D006144 7.8e-09 64.7 134 38.8
CiPaw.08G002400 Carya illinoinensis HOM05D004912 ORTHO05D006144 1.0e-08 64.3 115 43.5
Manes.18G104400 Manihot esculenta HOM05D004912 ORTHO05D006144 1.0e-08 64.3 141 38.3
Peaxi162Scf00154g00016 Petunia axillaris HOM05D004912 ORTHO05D006144 1.7e-08 63.5 135 39.3
PGR102G1759 Punica granatum HOM05D004912 ORTHO05D006144 1.7e-08 63.5 131 40.5
Dinv41750 Davidia involucrata HOM05D004912 ORTHO05D006144 2.3e-08 63.2 124 41.1
Lj3g0019671 Lotus japonicus HOM05D004912 ORTHO05D006144 3.0e-08 62.8 171 33.3
PGSC0003DMG400031411 Solanum tuberosum HOM05D004912 ORTHO05D006144 3.0e-08 62.8 120 40.0
SalBow7G4664 Salvia bowleyana HOM05D004912 ORTHO05D006144 3.9e-08 62.4 109 41.3
Hma1.2p1_0009F.1_g005990 Hydrangea macrophylla HOM05D004912 ORTHO05D006144 8.6e-08 61.2 114 39.5
TAR376G1051 Trochodendron aralioides HOM05D004912 ORTHO05D006144 1.1e-07 60.8 113 42.5
Gohir.D13G123600 Gossypium hirsutum HOM05D004912 ORTHO05D006144 1.5e-07 60.5 147 36.1
Gorai.013G138700 Gossypium raimondii HOM05D004912 ORTHO05D006144 1.5e-07 60.5 147 36.1
GSVIVG01001772001 Vitis vinifera HOM05D004912 ORTHO05D006144 1.9e-07 60.1 140 34.3
CAN.G635.17 Capsicum annuum HOM05D004912 ORTHO05D006144 2.5e-07 59.7 104 42.3
Gohir.A13G119900 Gossypium hirsutum HOM05D004912 ORTHO05D006144 2.5e-07 59.7 147 35.4
Sopen11g011640 Solanum pennellii HOM05D004912 ORTHO05D006144 5.6e-07 58.5 120 39.2
SGA_v2.0_scaffold118G32511 Striga asiatica HOM05D004912 ORTHO05D006144 5.6e-07 58.5 98 39.8
Lalb_Chr19g0140481 Lupinus albus HOM05D004912 ORTHO05D006144 7.3e-07 58.2 105 41.0
Aqoxy6G00063 Aquilegia oxysepala HOM05D004912 ORTHO05D006144 9.5e-07 57.8 135 36.3
HanXRQChr09g0260131 Helianthus annuus HOM05D004912 ORTHO05D006144 9.5e-07 57.8 114 35.1
Solyc11g022530.3 Solanum lycopersicum HOM05D004912 ORTHO05D006144 9.5e-07 57.8 122 38.5
Phvul.011G001700 Phaseolus vulgaris HOM05D004912 ORTHO05D006144 1.2e-06 57.4 121 38.8
Cpa.g.sc66.6 Carica papaya HOM05D004912 ORTHO05D006144 1.6e-06 57.0 160 34.4
Glyma.12G001600 Glycine max HOM05D004912 ORTHO05D006144 1.6e-06 57.0 121 37.2
Migut.N03366 Erythranthe guttata HOM05D004912 ORTHO05D006144 2.1e-06 56.6 116 37.9
Rhsim12G0007100 Rhododendron simsii HOM05D004912 ORTHO05D006144 2.1e-06 56.6 105 39.0
MD15G1407700 Malus domestica HOM05D004912 ORTHO05D006144 2.8e-06 56.2 121 36.4
arahy.Tifrunner.gnm1.ann1.NID8M3 Arachis hypogaea HOM05D004912 ORTHO05D006144 3.6e-06 55.8 128 35.9
VMungo1127G0246 Vigna mungo HOM05D004912 ORTHO05D006144 3.6e-06 55.8 121 38.0
GSVIVG01001769001 Vitis vinifera HOM05D004912 ORTHO05D006144 4.7e-06 55.5 144 35.4
CAN.G308.42 Capsicum annuum HOM05D004912 ORTHO05D006144 6.2e-06 55.1 135 33.3
Sc01g0001930 Simmondsia chinensis HOM05D004912 ORTHO05D006144 6.2e-06 55.1 114 40.4
Ah.05g178460 Amaranthus hybridus HOM05D004912 ORTHO05D006144 8.1e-06 54.7 135 37.8
Manes.02G197100 Manihot esculenta HOM05D004912 ORTHO05D006144 8.1e-06 54.7 101 38.6


User provided reference genes

Program Settings