Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0036100 Rhododendron simsii HOM05D007132 ORTHO05D009120 6.1e-76 287.3 138 100.0
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 2.5e-53 212.2 123 80.5
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 8.5e-46 187.2 109 82.6
Rhsim11G0036200 Rhododendron simsii HOM05D007132 ORTHO05D009120 5.5e-45 184.5 98 91.8
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 1.0e-43 180.3 121 75.2
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 2.0e-34 149.4 126 59.5
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 2.0e-34 149.4 125 61.6
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 5.7e-34 147.9 92 73.9
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 1.3e-33 146.7 124 62.1
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 2.2e-33 146.0 101 69.3
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 4.9e-33 144.8 95 68.4
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 8.3e-33 144.1 101 66.3
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.1e-32 143.7 108 64.8
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 1.4e-32 143.3 115 62.6
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 1.8e-32 142.9 101 67.3
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 2.4e-32 142.5 78 80.8
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 2.4e-32 142.5 124 61.3
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 3.1e-32 142.1 94 72.3
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 3.1e-32 142.1 124 61.3
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 3.1e-32 142.1 119 57.1
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 3.1e-32 142.1 101 67.3
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 3.1e-32 142.1 110 63.6
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 5.4e-32 141.4 107 62.6
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 5.4e-32 141.4 90 70.0
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 1.2e-31 140.2 106 66.0
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 1.6e-31 139.8 91 72.5
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 2.0e-31 139.4 96 68.8
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 2.0e-31 139.4 95 69.5
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 2.0e-31 139.4 100 67.0
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 2.7e-31 139.0 85 72.9
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 5.9e-31 137.9 111 62.2
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 7.7e-31 137.5 122 58.2
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 1.0e-30 137.1 125 56.8
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 1.0e-30 137.1 118 60.2
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 1.3e-30 136.7 72 80.6
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 1.7e-30 136.3 83 73.5
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 1.7e-30 136.3 66 86.4
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 1.7e-30 136.3 76 78.9
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 2.3e-30 136.0 103 61.2
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 2.9e-30 135.6 89 71.9
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 3.8e-30 135.2 120 60.0
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 3.8e-30 135.2 112 60.7
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 3.8e-30 135.2 114 57.9
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 6.6e-30 134.4 69 84.1
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 8.6e-30 134.0 75 77.3
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 1.1e-29 133.7 73 78.1
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 1.1e-29 133.7 74 75.7
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 1.5e-29 133.3 75 74.7
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 1.5e-29 133.3 79 78.5
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 1.5e-29 133.3 76 73.7
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 1.5e-29 133.3 98 67.3
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 1.9e-29 132.9 75 76.0
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 1.9e-29 132.9 73 79.5
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 1.9e-29 132.9 79 78.5
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 2.5e-29 132.5 74 78.4
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 4.2e-29 131.7 75 74.7
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 5.5e-29 131.3 73 76.7
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 5.5e-29 131.3 76 76.3
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 7.2e-29 131.0 75 74.7
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 7.2e-29 131.0 98 65.3
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 7.2e-29 131.0 97 64.9
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 9.5e-29 130.6 109 59.6
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 1.2e-28 130.2 71 77.5
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 1.2e-28 130.2 75 76.0
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 1.2e-28 130.2 75 73.3
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 1.2e-28 130.2 75 73.3
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 1.2e-28 130.2 84 70.2
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 2.8e-28 129.0 97 61.9
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 3.6e-28 128.6 80 72.5
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 4.7e-28 128.3 75 77.3
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 4.7e-28 128.3 75 77.3
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 4.7e-28 128.3 88 68.2
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 8.0e-28 127.5 75 73.3
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.0e-27 127.1 73 78.1
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 6.8e-27 124.4 109 57.8
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 6.8e-27 124.4 82 70.7
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 8.9e-27 124.0 93 66.7
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.2e-26 123.6 93 66.7
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 7.5e-26 120.9 69 78.3
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 7.5e-26 120.9 69 78.3
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 7.5e-26 120.9 137 48.2
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 9.8e-26 120.6 72 76.4
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 2.9e-25 119.0 79 64.6
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 4.9e-25 118.2 65 78.5
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 4.9e-25 118.2 72 69.4
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.1e-24 117.1 69 73.9
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.1e-24 117.1 108 56.5
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 1.1e-24 117.1 64 73.4
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 2.7e-23 112.5 70 72.9
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 1.2e-18 97.1 52 78.8
Haze_08440 Corylus avellana HOM05D000433 ORTHO05D000443 1.1e-16 90.5 58 72.4
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 2.0e-15 86.3 50 68.0
Lalb_Chr05g0215031 Lupinus albus HOM05D007132 ORTHO05D009120 3.5e-15 85.5 66 60.6
Psat2g145800 Pisum sativum HOM05D007132 ORTHO05D009120 4.6e-15 85.1 64 64.1
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 1.2e-12 77.0 59 55.9
Medtr5g032230 Medicago truncatula HOM05D007132 ORTHO05D009120 4.9e-09 65.1 90 45.6
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 8.3e-09 64.3 56 46.4
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 2.1e-07 59.7 40 57.5
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 7.8e-07 57.8 69 36.2


User provided reference genes

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