Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0033100 Rhododendron simsii HOM05D008336 ORTHO05D011831 8.3e-298 1026.2 480 100.0
Rhsim06G0201900 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.6e-120 437.2 445 48.8
Rhsim03G0026300 Rhododendron simsii HOM05D008336 ORTHO05D011831 8.2e-120 434.9 445 48.5
Rhsim11G0150300 Rhododendron simsii HOM05D008336 ORTHO05D011831 8.2e-120 434.9 445 48.5
Rhsim03G0238200 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.8e-119 433.7 445 48.3
Rhsim12G0007400 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.8e-119 433.7 445 48.3
RhsimUnG0171800 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.8e-119 433.7 445 48.3
Rhsim02G0185700 Rhododendron simsii HOM05D008336 ORTHO05D011831 4.2e-116 422.5 435 49.9
Rhsim10G0210400 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.0e-109 401.4 449 47.0
Rhsim12G0075400 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.4e-74 284.6 404 41.3
Rhsim11G0171400 Rhododendron simsii HOM05D008336 ORTHO05D011831 3.3e-68 263.5 139 85.6
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.5e-49 199.1 108 91.7
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.1e-47 195.3 109 89.0
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.6e-35 154.8 269 33.1
vmacro04074 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 6.4e-32 142.9 259 32.0
Rhsim11G0109300 Rhododendron simsii HOM05D019892 ORTHO05D023103 2.3e-29 134.4 74 90.5
Rhsim03G0023700 Rhododendron simsii HOM05D001309 ORTHO05D020353 2.5e-28 131.0 92 70.7
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.3e-28 130.6 88 70.5
Rhsim10G0059000 Rhododendron simsii HOM05D008336 ORTHO05D011520 6.2e-27 126.3 246 26.8
Rhsim08G0097100 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.0e-26 123.6 246 26.4
vmacro12721 Vaccinium macrocarpon HOM05D008336 ORTHO05D011520 2.9e-24 117.5 260 30.0
Rhsim03G0184000 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.9e-20 104.8 97 59.8
Rhsim07G0148600 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.3e-19 102.1 236 28.8
vmacro16020 Vaccinium macrocarpon HOM05D008336 ORTHO05D011520 2.8e-19 100.9 240 26.7
Rhsim04G0025800 Rhododendron simsii HOM05D000001 ORTHO05D009676 4.8e-19 100.1 202 30.2
Rhsim04G0040900 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.0e-18 97.1 175 32.6
Rhsim01G0161000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-17 95.5 250 24.8
Rhsim13G0221100 Rhododendron simsii HOM05D008336 ORTHO05D011520 2.0e-17 94.7 291 26.8
Rhsim02G0134100 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.9e-15 88.2 172 27.3
vmacro00037 Vaccinium macrocarpon HOM05D000255 ORTHO05D000935 7.1e-15 86.3 178 31.5
Rhsim03G0238100 Rhododendron simsii HOM05D018455 ORTHO05D011831 1.2e-14 85.5 173 27.2
Rhsim10G0210300 Rhododendron simsii HOM05D018455 ORTHO05D011831 1.2e-14 85.5 173 27.2
vmacro06917 Vaccinium macrocarpon HOM05D008336 ORTHO05D023109 1.6e-14 85.1 139 28.8
vmacro22341 Vaccinium macrocarpon HOM05D019892 ORTHO05D023103 1.6e-14 85.1 115 40.0
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-14 84.7 157 35.7
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-14 84.3 143 39.2
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-14 84.3 143 39.2
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 7.9e-14 82.8 99 46.5
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.0e-13 82.4 143 38.5
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-13 82.0 167 34.1
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-13 80.9 157 35.7
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-13 80.9 139 39.6
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.1e-13 80.1 133 39.8
Rhsim04G0177200 Rhododendron simsii HOM05D019892 ORTHO05D023103 6.7e-13 79.7 99 44.4
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.3e-12 77.0 139 38.8
Rhsim05G0128500 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.6e-11 75.1 69 44.9
Rhsim03G0100300 Rhododendron simsii HOM05D008336 ORTHO05D339595 1.1e-10 72.4 198 24.2
Rhsim01G0171000 Rhododendron simsii HOM05D008336 ORTHO05D011520 5.3e-10 70.1 82 34.1
Rhsim05G0119300 Rhododendron simsii HOM05D019892 ORTHO05D023103 5.3e-10 70.1 99 40.4
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-09 68.2 176 31.8
Rhsim11G0031600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-09 66.6 104 45.2
vmacro21693 Vaccinium macrocarpon HOM05D000012 ORTHO05D426954 3.8e-08 63.9 51 68.6
Rhsim06G0109800 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.2e-07 60.5 102 33.3
vmacro04464 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 4.2e-07 60.5 83 33.7


User provided reference genes

Program Settings