Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0032200 Rhododendron simsii HOM05D000007 ORTHO05D013648 4.9e-145 517.7 245 100.0
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 9.1e-75 284.3 246 60.2
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.9e-73 279.3 245 59.6
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 1.6e-71 273.5 241 60.6
vmacro22600 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.1e-63 246.5 258 51.2
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 1.0e-62 244.2 248 53.2
Rhsim02G0239200 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.0e-54 217.6 258 52.3
Rhsim06G0130000 Rhododendron simsii HOM05D000007 ORTHO05D013648 5.4e-51 205.3 253 47.8
vmacro22599 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.0e-42 176.8 255 40.8
Rhsim05G0077300 Rhododendron simsii HOM05D000007 ORTHO05D013648 7.0e-35 151.8 245 38.4
Actinidia38708 Actinidia chinensis HOM05D000007 ORTHO05D013648 1.2e-34 151.0 207 46.9
Rhsim03G0245800 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.0e-33 147.9 245 40.0
Rhsim02G0077500 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.4e-30 137.5 157 48.4
RhsimUnG0076700 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.7e-28 130.6 245 35.5
RhsimUnG0026700 Rhododendron simsii HOM05D000002 ORTHO05D013648 1.5e-16 90.9 159 37.7
Lj8P355T18 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-14 83.2 245 30.6
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-13 80.5 244 29.9
Cpa.g.sc51.32 Carica papaya HOM05D000007 ORTHO05D000039 4.4e-13 79.3 230 25.2
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.4e-13 79.3 238 26.1
Actinidia27873 Actinidia chinensis HOM05D000007 ORTHO05D013648 7.6e-13 78.6 146 37.0
QL04p029107 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-12 77.0 247 27.5
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 4.2e-11 72.8 241 25.7
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 4.6e-10 69.3 243 28.4
QL04p026176 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-10 68.9 240 25.8
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 7.8e-10 68.6 245 26.5
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 7.8e-10 68.6 246 24.4
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.7e-09 67.4 239 25.5
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 1.7e-09 67.4 241 24.1
QL05p044233 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-09 67.4 244 25.0
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.1e-09 65.9 241 23.2
Nitab4.5_0011068g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.1e-09 65.9 251 25.5
Prupe.6G320600 Prunus persica HOM05D000007 ORTHO05D000039 5.1e-09 65.9 205 29.8
Peaxi162Scf00129g00107 Petunia axillaris HOM05D000007 ORTHO05D000039 6.6e-09 65.5 243 28.8
QL04p026212 Quercus lobata HOM05D000007 ORTHO05D000039 8.7e-09 65.1 238 25.6
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 8.7e-09 65.1 239 25.1
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.1e-08 64.7 241 22.8
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.9e-08 63.9 242 23.1
Aqoxy4G03268 Aquilegia oxysepala HOM05D026885 ORTHO05D026721 2.5e-08 63.5 258 26.4
Nitab4.5_0004124g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 2.5e-08 63.5 252 25.0
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-08 62.8 249 26.5
Solyc01g055160.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.3e-08 62.8 252 25.4
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 5.6e-08 62.4 181 27.1
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 7.3e-08 62.0 237 27.8
Peaxi162Scf00201g10132 Petunia axillaris HOM05D000007 ORTHO05D000039 7.3e-08 62.0 255 27.1
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-07 61.2 207 26.6
Lalb_Chr02g0151161 Lupinus albus HOM05D000007 ORTHO05D000039 1.3e-07 61.2 253 26.9
Nitab4.5_0003611g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.3e-07 61.2 252 25.0
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-07 61.2 207 28.0
Haze_02821 Corylus avellana HOM05D000007 ORTHO05D000039 1.6e-07 60.8 249 24.9
Dinv42745 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 207 31.4
Dinv43356 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 207 31.4
Lalb_Chr16g0387961 Lupinus albus HOM05D000007 ORTHO05D020439 1.6e-07 60.8 241 26.1
MD12G1213000 Malus domestica HOM05D000007 ORTHO05D000039 1.6e-07 60.8 241 25.7
QL03p073760 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 248 25.0
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 244 24.2
QL04p029296 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 176 27.3
Actinidia27875 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.8e-07 60.1 146 29.5
Glyma.19G081700 Glycine max HOM05D000007 ORTHO05D000039 2.8e-07 60.1 241 24.1
CiPaw.03G276600 Carya illinoinensis HOM05D000007 ORTHO05D000521 4.8e-07 59.3 164 26.2
FvH4_3g18860 Fragaria vesca HOM05D000007 ORTHO05D000039 4.8e-07 59.3 161 28.6
Phvul.006G204575 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 6.2e-07 58.9 167 31.7
TWI36G1182 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.2e-07 58.9 256 25.4
QL05p044326 Quercus lobata HOM05D000007 ORTHO05D000039 8.1e-07 58.5 115 33.0
Sed0015533 Sechium edule HOM05D000007 ORTHO05D000039 8.1e-07 58.5 243 24.3
RcHm_v2.0_Chr3g0456251 Rosa chinensis HOM05D000007 ORTHO05D000039 1.1e-06 58.2 205 26.3
Glyma.16G063500 Glycine max HOM05D000007 ORTHO05D000039 1.4e-06 57.8 242 24.4
PSO170G3377 Papaver somniferum HOM05D000007 ORTHO05D000017 1.4e-06 57.8 172 26.7
RcHm_v2.0_Chr3g0457391 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-06 57.8 255 22.7
Aqoxy4G03265 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 2.4e-06 57.0 207 27.5
HanXRQChr15g0464341 Helianthus annuus HOM05D000007 ORTHO05D000039 2.4e-06 57.0 201 25.9
PSO478G0592 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-06 57.0 242 26.9
Rhsim11G0036300 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.0e-06 56.2 238 23.9
FvH4_6g06790 Fragaria vesca HOM05D000007 ORTHO05D000039 6.9e-06 55.5 251 23.5
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 6.9e-06 55.5 244 25.0
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 9.0e-06 55.1 248 25.4
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 9.0e-06 55.1 242 25.6


User provided reference genes

Program Settings