Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.5e-228 795.8 403 100.0
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 6.3e-158 561.2 408 72.8
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.6e-153 546.6 403 72.0
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.2e-142 509.6 321 79.1
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 2.1e-137 493.0 403 66.5
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 2.3e-136 489.6 288 87.2
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 4.9e-134 481.9 394 64.5
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 9.5e-130 467.6 358 66.5
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 4.7e-129 465.3 392 64.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 6.2e-129 464.9 397 64.2
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 6.2e-129 464.9 392 62.2
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.1e-129 464.5 402 60.9
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.4e-128 463.8 401 61.6
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.2e-127 460.7 402 61.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 3.4e-127 459.1 393 62.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-126 457.2 402 60.0
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.2e-126 456.4 319 70.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.2e-126 456.4 377 62.6
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.9e-126 456.1 377 62.6
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 4.9e-126 455.3 399 62.4
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 8.4e-126 454.5 399 60.7
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.9e-125 453.4 393 61.8
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.9e-125 453.4 419 58.5
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.9e-125 453.4 377 62.3
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 5.4e-125 451.8 393 61.3
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 7.1e-125 451.4 398 59.3
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.2e-124 450.7 393 60.6
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.6e-124 450.3 393 60.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.6e-124 450.3 392 59.9
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 6.0e-124 448.4 382 62.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.0e-123 447.6 390 60.8
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.3e-123 446.4 413 58.6
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 3.0e-123 446.0 379 60.9
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 3.0e-123 446.0 390 60.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 5.1e-123 445.3 398 58.3
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 5.1e-123 445.3 336 67.0
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 5.1e-123 445.3 336 67.0
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 6.6e-123 444.9 383 60.3
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 6.6e-123 444.9 393 62.6
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 8.6e-123 444.5 378 61.6
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.1e-122 444.1 405 60.7
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 1.9e-122 443.4 385 59.2
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.5e-122 443.0 370 62.2
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 9.6e-122 441.0 390 59.5
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 9.6e-122 441.0 330 66.7
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.1e-121 439.9 339 65.8
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 8.1e-121 438.0 333 65.8
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.8e-120 436.8 396 58.3
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.4e-120 436.4 400 59.2
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 3.1e-120 436.0 334 65.9
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 3.1e-120 436.0 367 62.1
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 1.5e-119 433.7 329 65.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.0e-119 433.3 346 64.2
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 2.0e-119 433.3 313 69.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 2.6e-119 433.0 334 65.0
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 3.4e-119 432.6 334 65.3
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 7.6e-119 431.4 334 65.0
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 9.9e-119 431.0 383 59.8
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 9.9e-119 431.0 382 60.2
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.3e-118 430.6 334 64.7
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-118 430.3 334 64.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-118 430.3 334 64.7
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.9e-118 429.5 352 63.4
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 4.9e-118 428.7 391 58.1
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 8.4e-118 427.9 439 54.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.1e-117 427.6 334 64.4
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.1e-117 427.6 332 64.8
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.2e-116 424.1 317 68.1
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.6e-116 423.7 322 65.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 7.8e-116 421.4 332 63.3
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.9e-115 419.1 332 63.0
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.5e-114 417.2 399 58.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 4.8e-113 412.1 399 57.6
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 6.2e-113 411.8 304 68.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 4.0e-112 409.1 318 63.2
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 6.9e-112 408.3 313 65.5
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.0e-111 406.8 331 61.0
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 3.8e-110 402.5 398 55.8
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 4.9e-110 402.1 394 55.6
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.4e-109 400.6 371 59.0
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.1e-108 396.7 337 60.5
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.8e-107 393.7 343 60.9
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 5.1e-107 392.1 384 54.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.9e-106 390.2 340 61.2
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 3.3e-106 389.4 396 56.1
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.3e-105 387.5 349 56.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 1.6e-105 387.1 392 52.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 5.3e-104 382.1 395 52.7
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 9.0e-104 381.3 288 66.3
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-102 377.5 346 58.1
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.3e-101 371.3 310 61.6
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.1e-98 364.4 343 58.9
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.5e-98 364.0 293 63.1
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 4.3e-98 362.5 384 52.3
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.8e-97 359.8 346 55.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.0e-96 355.9 360 54.4
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.3e-90 335.9 241 68.9
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-88 331.3 369 52.0
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 5.3e-88 328.9 532 40.8
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 3.8e-86 322.8 315 52.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.5e-79 299.3 282 56.4
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.7e-78 297.4 323 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 5.0e-70 269.2 397 41.3
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.4e-69 267.7 342 40.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.6e-68 264.2 319 44.2
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.1e-66 258.1 247 55.1
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 9.7e-66 255.0 221 60.2
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 2.3e-59 233.8 173 71.7
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.7e-55 218.8 213 56.8
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.0e-54 218.4 188 59.6
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.5e-47 193.4 175 57.7
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.6e-44 183.3 134 64.9
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 6.8e-43 179.1 174 54.6
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 4.4e-42 176.4 140 60.0
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 9.5e-37 158.7 176 52.3
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 2.0e-34 151.0 176 48.9
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-33 147.9 176 49.4
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.0e-30 138.7 112 58.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 9.5e-29 132.1 192 42.2
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 9.5e-29 132.1 217 34.1
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.4e-24 117.5 105 61.0
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 9.5e-21 105.5 102 54.9
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 3.4e-18 97.1 208 32.7
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 9.9e-10 68.9 224 25.4
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 4.1e-08 63.5 36 77.8
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 4.1e-08 63.5 36 77.8
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 4.1e-08 63.5 31 83.9
AagrBONN_evm.TU.Sc2ySwM_117.1659 Anthoceros agrestis HOM05D002058 ORTHO05D003758 7.1e-08 62.8 174 32.2
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 7.1e-08 62.8 166 30.1
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 9.2e-08 62.4 113 38.1
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 7.8e-07 59.3 177 26.6
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.7e-06 58.2 155 29.7


User provided reference genes

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