Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 7.7e-299 1029.6 495 100.0
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 9.9e-153 544.3 491 62.1
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 8.4e-136 488.0 440 57.3
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 8.1e-131 471.5 439 56.7
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 4.5e-129 465.7 433 56.6
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.6e-123 447.2 428 54.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 2.8e-123 446.4 423 54.4
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 7.4e-116 421.8 425 52.9
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 4.8e-115 419.1 413 51.8
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 9.0e-114 414.8 428 51.9
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.2e-113 414.5 426 51.6
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 2.2e-112 410.2 435 50.3
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 9.3e-111 404.8 433 49.7
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.6e-110 404.1 407 54.1
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 7.9e-110 401.7 413 49.4
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 1.0e-109 401.4 417 50.6
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.3e-109 401.0 418 51.4
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.3e-109 400.2 414 49.3
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 3.9e-109 399.4 426 50.2
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 6.7e-109 398.7 417 50.4
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 6.7e-109 398.7 415 49.6
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.5e-108 397.5 414 49.8
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 3.3e-108 396.4 434 49.5
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 5.7e-108 395.6 431 48.7
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.6e-107 394.0 418 50.2
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.6e-107 394.0 418 50.2
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.7e-107 392.9 406 49.8
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 3.7e-107 392.9 417 48.7
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 4.1e-106 389.4 404 50.2
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 5.3e-106 389.0 449 47.7
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 6.9e-106 388.7 412 49.3
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 9.0e-106 388.3 440 47.0
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.2e-105 387.9 464 46.6
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 2.9e-104 383.3 434 47.9
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.5e-104 382.1 410 49.3
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 8.5e-104 381.7 419 48.4
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 1.9e-103 380.6 410 48.3
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 3.2e-103 379.8 431 46.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 4.2e-103 379.4 407 48.9
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 7.2e-103 378.6 426 47.9
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 2.7e-102 376.7 424 46.9
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 3.6e-102 376.3 419 48.7
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 3.6e-102 376.3 418 49.0
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 6.1e-102 375.6 427 48.0
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 1.0e-101 374.8 404 48.8
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 1.8e-101 374.0 420 47.6
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 3.9e-101 372.9 419 48.0
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 6.7e-101 372.1 419 48.2
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 6.7e-101 372.1 427 46.8
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 8.8e-101 371.7 428 46.0
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.8e-101 371.7 430 47.0
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 4.3e-100 369.4 430 47.4
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 5.7e-100 369.0 431 46.6
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 7.4e-100 368.6 433 45.0
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 9.7e-100 368.2 412 47.8
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.8e-99 366.7 419 46.8
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 2.8e-99 366.7 430 46.3
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.1e-98 364.8 424 46.5
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.4e-98 364.4 418 47.1
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 1.4e-98 364.4 438 46.1
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 4.1e-98 362.8 410 45.6
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 3.4e-97 359.8 429 45.0
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.0e-96 358.2 428 46.0
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.7e-96 357.5 415 47.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 6.5e-96 355.5 420 45.7
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 1.1e-95 354.8 418 47.1
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.5e-95 353.6 455 43.7
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 3.2e-95 353.2 407 46.2
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.2e-94 351.3 419 47.5
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.6e-94 350.9 432 45.6
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.6e-94 350.9 380 50.5
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.6e-94 350.9 411 46.5
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.1e-94 350.5 417 44.6
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 3.6e-94 349.7 412 44.7
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 3.0e-93 346.7 414 43.7
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 1.1e-92 344.7 418 43.8
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.0e-92 344.0 413 45.0
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 3.3e-92 343.2 414 45.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 7.4e-92 342.0 418 44.5
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 1.3e-91 341.3 407 45.0
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.7e-91 340.9 413 44.8
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.2e-91 340.5 408 45.3
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.8e-90 337.4 422 46.7
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 2.4e-90 337.0 434 44.0
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 6.9e-90 335.5 434 42.4
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 2.6e-89 333.6 431 42.5
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.0e-88 331.6 413 43.3
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 2.9e-88 330.1 413 42.9
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.2e-87 326.2 405 43.7
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 9.4e-87 325.1 404 43.1
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 7.0e-82 308.9 423 41.1
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 2.0e-81 307.4 406 42.9
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 5.9e-81 305.8 415 40.5
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-79 301.2 416 40.6
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 3.0e-77 293.5 238 62.6
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 5.2e-77 292.7 430 40.2
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.7e-75 286.6 419 38.9
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 4.5e-73 279.6 432 36.8
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 2.7e-70 270.4 405 38.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.6e-60 237.3 452 32.3
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 3.8e-56 223.4 425 31.8
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 5.8e-52 209.5 296 39.9
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.6e-48 196.1 411 31.1
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 2.3e-45 187.6 121 73.6
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 9.2e-42 175.6 267 39.3
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.2e-38 165.2 475 27.8
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.9e-34 151.4 119 61.3
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.7e-33 147.5 372 28.2
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 1.1e-29 135.6 86 62.8
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.9e-10 71.6 66 57.6


User provided reference genes

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