Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-279 964.9 498 100.0
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.3e-208 727.2 514 78.8
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-167 592.0 407 80.6
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.5e-120 435.3 507 52.5
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-99 366.7 497 48.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.3e-93 347.1 308 63.0
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-91 339.7 347 54.5
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.7e-89 332.0 472 44.9
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.8e-85 318.9 507 45.4
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-84 317.8 497 40.2
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.4e-82 309.3 444 47.1
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-81 307.4 412 44.9
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-80 304.7 496 38.5
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-78 296.6 437 42.3
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-78 296.6 437 42.3
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-78 296.6 437 42.3
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-78 296.6 437 42.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-76 291.6 437 41.9
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.8e-76 288.5 437 41.6
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-75 287.3 437 41.6
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-74 284.3 489 36.6
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-65 254.2 486 34.4
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.7e-65 253.8 512 35.7
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-65 253.8 275 53.1
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.3e-64 251.5 480 34.4
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.6e-60 237.3 290 46.6
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.5e-60 235.7 478 33.9
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.5e-57 226.9 464 34.1
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-56 224.9 260 51.5
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-56 223.0 178 61.2
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-53 213.8 312 43.9
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-53 213.4 312 43.3
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.8e-53 212.6 312 43.9
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.5e-52 211.5 293 38.6
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.4e-52 210.3 312 42.9
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 5.8e-52 209.5 462 33.1
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.9e-51 206.5 312 42.3
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 2.1e-49 201.1 457 31.1
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.9e-48 196.8 266 45.1
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 5.1e-48 196.4 283 37.1
Rhsim02G0147600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-47 194.9 475 32.0
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-44 184.1 136 60.3
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.8e-43 180.3 136 58.8
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.4e-43 179.5 136 58.8
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-42 177.9 136 58.1
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-42 177.6 462 30.1
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.7e-41 174.1 537 27.2
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-39 168.3 309 37.2
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.2e-35 154.5 240 36.7
Rhsim01G0051400 Rhododendron simsii HOM05D007798 ORTHO05D023239 1.1e-34 152.1 158 55.7
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.6e-33 146.7 283 31.4
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.9e-32 143.7 395 32.4
Rhsim07G0152100 Rhododendron simsii HOM05D007798 ORTHO05D023239 1.1e-31 142.1 158 54.4
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-31 140.2 351 30.2
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-30 138.3 287 34.8
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 3.6e-30 137.1 470 28.7
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-28 131.0 108 59.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.3e-24 118.6 466 25.5
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-23 115.2 88 61.4
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 2.5e-23 114.4 461 25.6
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.3e-23 114.0 466 25.1
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 5.6e-23 113.2 261 33.7
Rhsim06G0086000 Rhododendron simsii HOM05D007798 ORTHO05D023239 2.1e-22 111.3 132 52.3
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.3e-21 106.7 271 29.5
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 2.6e-20 104.4 204 35.8
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.4e-20 104.0 346 29.2
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.2e-19 101.3 261 31.4
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.2e-19 101.3 298 28.9
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 2.2e-19 101.3 274 28.1
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.5e-18 96.7 426 24.4
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.3e-18 95.9 278 28.8
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.2e-17 95.5 129 44.2
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-17 95.1 302 26.8
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-17 94.4 314 29.0
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-17 94.4 314 28.0
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-17 94.0 304 28.0
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.6e-17 93.6 276 29.0
Rhsim02G0156500 Rhododendron simsii HOM05D007798 ORTHO05D023239 5.1e-16 90.1 114 50.9
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-16 89.4 278 28.4
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-15 85.9 300 28.0
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-14 85.5 299 28.8
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 1.6e-14 85.1 296 25.3
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-14 84.0 225 28.4
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-14 83.6 328 27.1
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 6.3e-14 83.2 87 42.5
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.2e-14 82.8 279 28.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.2e-14 82.8 482 22.6
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-13 82.4 272 26.8
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.8e-13 81.6 320 26.9
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-13 81.3 128 37.5
Rhsim02G0160200 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-13 80.1 111 45.0
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.3e-13 80.1 249 25.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.9e-13 79.7 437 23.3
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 6.9e-13 79.7 270 24.4
Hma1.2p1_0431F.1_g151610 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 9.0e-13 79.3 88 42.0
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 2.6e-12 77.8 225 25.8
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.4e-12 77.4 183 31.7
Actinidia07484 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.5e-12 77.0 161 36.0
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.9e-12 76.6 498 22.3
MBI16_g08490_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-12 76.3 279 26.9
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.3e-11 75.5 145 32.4
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-11 75.5 281 24.9
MBI06_g14034_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.8e-11 73.9 364 26.4
Rhsim03G0043500 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-11 73.9 128 46.9
MBI07_g06917_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.5e-11 72.8 206 28.6
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.2e-10 70.9 150 29.3
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 3.2e-10 70.9 305 23.6
MBI09_g45689_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-10 70.5 384 24.2
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-10 70.5 331 26.6
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 5.5e-10 70.1 149 29.5
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 5.5e-10 70.1 221 24.9
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.3e-10 69.3 68 48.5
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.3e-10 69.3 150 28.0
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.3e-10 69.3 150 28.0
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.3e-10 69.3 150 28.0
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-09 68.6 46 65.2
MBI16_g34285_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.1e-09 66.6 232 27.6
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.1e-09 66.6 219 26.9
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.1e-09 66.6 415 23.1
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 1.0e-08 65.9 235 23.0
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-08 65.9 216 28.2
Rhsim06G0139800 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-08 65.9 96 41.7
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.8e-08 65.1 210 28.1
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 2.3e-08 64.7 178 28.1
MBI17_g07057_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-08 64.3 226 28.8
Rhsim01G0155300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-08 64.3 72 56.9
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.0e-08 64.3 495 21.2
MBI17_g16495_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.7e-08 63.2 278 26.3
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 6.7e-08 63.2 55 50.9
Actinidia36705 Actinidia chinensis HOM05D007798 ORTHO05D009882 8.7e-08 62.8 83 42.2
EL10Ac5g11849 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-07 61.6 187 26.2
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-07 61.6 192 27.1
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-07 61.6 346 22.8
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-07 61.2 179 29.1
MBI18_g39301_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-07 61.2 193 28.0
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 3.3e-07 60.8 177 27.7
MBI18_g01981_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-07 60.8 182 28.6
EL10Ac8g19342 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-07 60.5 180 26.7
MBI11_g21812_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-07 60.5 181 29.3
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 5.7e-07 60.1 169 24.3
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-06 58.9 152 30.9
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-06 58.5 224 26.8
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-06 57.8 39 61.5
MBI05_g11193_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-06 57.8 167 28.7
MBI14_g32811_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-06 57.8 170 30.0
Rhsim05G0119300 Rhododendron simsii HOM05D019892 ORTHO05D023103 2.8e-06 57.8 103 36.9
MBI10_g43794_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-06 57.4 220 25.5
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 4.8e-06 57.0 177 28.2
MBI05_g15995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-06 57.0 179 27.9
RcHm_v2.0_Chr0c17g0499961 Rosa chinensis HOM05D008705 ORTHO05D000669 4.8e-06 57.0 113 31.0
Actinidia03187 Actinidia chinensis HOM05D000070 ORTHO05D006344 8.2e-06 56.2 57 47.4
Actinidia05047 Actinidia chinensis HOM05D007798 ORTHO05D009882 8.2e-06 56.2 57 47.4


User provided reference genes

Program Settings