Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.3e-291 1003.0 528 100.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.3e-230 803.1 525 83.0
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.9e-229 797.3 539 80.9
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.2e-111 407.9 574 44.6
Rhsim07G0151700 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.4e-109 401.0 332 66.9
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.1e-107 392.5 575 43.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.0e-104 382.9 534 44.9
Rhsim08G0151500 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.1e-82 311.6 250 66.4
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.3e-57 225.7 461 35.4
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.2e-43 179.9 320 37.8
Rhsim08G0110800 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.4e-40 171.0 491 32.6
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.6e-38 162.5 250 40.8
Rhsim08G0062000 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.3e-37 160.2 554 28.9
Rhsim11G0023000 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.6e-22 109.8 163 42.9
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-19 102.1 458 26.6
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.9e-17 93.6 308 30.5
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.4e-17 92.8 477 24.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-16 91.7 277 25.6
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.2e-16 90.9 278 24.8
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 7.1e-16 89.7 205 37.1
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-15 89.0 278 24.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-15 89.0 278 24.8
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-15 88.6 278 24.8
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.5e-15 87.4 278 24.8
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.8e-15 86.3 278 24.1
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.0e-14 85.9 225 30.7
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.3e-14 84.7 332 25.3
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.1e-13 82.4 212 26.9
Rhsim03G0061400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.9e-13 81.6 94 48.9
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.9e-13 81.6 432 24.8
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.9e-13 81.6 322 24.5
RhsimUnG0113100 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.3e-13 80.9 106 46.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.3e-13 79.7 277 24.9
Rhsim12G0098300 Rhododendron simsii HOM05D061456 ORTHO05D339227 9.6e-13 79.3 100 48.0
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-12 79.0 408 24.3
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.1e-12 78.2 186 28.0
Rhsim11G0023500 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.8e-12 77.0 94 47.9
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-11 75.5 168 29.8
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-11 75.5 168 29.8
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-11 75.5 168 29.8
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.8e-11 75.1 220 27.7
Rhsim08G0138200 Rhododendron simsii HOM05D061456 ORTHO05D338598 1.8e-11 75.1 100 47.0
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-11 74.7 505 22.8
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.1e-11 74.3 156 30.1
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 3.1e-11 74.3 187 28.3
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.9e-11 73.2 366 26.0
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-10 72.0 157 29.9
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.0e-10 71.6 158 28.5
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-10 70.9 227 27.8
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.4e-10 70.9 255 23.5
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.4e-10 70.5 154 28.6
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.4e-10 70.5 154 28.6
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-10 69.7 159 27.7
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-09 68.6 361 23.0
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-09 67.8 495 21.2
Rhsim05G0147200 Rhododendron simsii HOM05D009565 ORTHO05D037459 4.9e-09 67.0 170 36.5
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.4e-09 66.6 201 26.9
Rhsim02G0107900 Rhododendron simsii HOM05D009565 ORTHO05D037459 8.4e-09 66.2 168 37.5
vmacro22157 Vaccinium macrocarpon HOM05D009565 ORTHO05D009316 8.4e-09 66.2 76 44.7
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-08 64.3 170 35.9
Rhsim10G0166000 Rhododendron simsii HOM05D007314 ORTHO05D009316 1.6e-07 62.0 103 39.8
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.0e-07 60.1 256 22.7
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 7.9e-07 59.7 193 30.1
Rhsim11G0005200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-06 58.9 93 43.0
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.7e-06 58.5 517 21.1
Rhsim01G0163400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-06 58.2 196 30.6
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 3.9e-06 57.4 206 28.2
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 6.6e-06 56.6 178 32.6
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 8.7e-06 56.2 231 22.9


User provided reference genes

Program Settings