Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.8e-152 540.4 270 100.0
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-107 391.3 431 54.3
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-96 356.7 364 58.5
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-89 333.6 275 68.4
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-85 319.3 266 67.7
Rhsim02G0147600 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.1e-76 287.7 330 53.9
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-70 270.0 229 65.1
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-70 269.6 231 64.5
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.4e-70 268.1 229 64.6
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-56 223.4 337 40.4
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.8e-53 213.0 242 49.6
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.5e-49 198.7 443 33.2
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.4e-46 189.5 336 36.6
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-42 174.9 462 30.1
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.8e-39 167.2 329 34.7
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 9.8e-38 161.4 276 39.5
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-37 159.8 304 33.6
Rhsim03G0043500 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.7e-35 153.3 84 89.3
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 6.6e-34 148.7 273 38.5
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.6e-34 148.3 346 32.7
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-34 148.3 320 31.6
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-32 144.4 346 32.1
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-32 144.4 346 32.1
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-32 144.4 346 32.1
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-32 143.3 346 31.8
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-32 142.5 346 31.8
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-31 140.6 346 31.8
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 4.0e-31 139.4 281 32.4
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-30 137.9 80 85.0
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-30 137.9 266 35.7
Rhsim01G0051400 Rhododendron simsii HOM05D007798 ORTHO05D023239 1.3e-29 134.4 149 53.7
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.4e-29 132.1 270 34.4
Rhsim07G0152100 Rhododendron simsii HOM05D007798 ORTHO05D023239 7.0e-28 128.6 149 54.4
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.3e-26 124.4 379 28.2
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-26 124.4 144 49.3
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.9e-26 122.9 165 44.8
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-25 120.6 363 29.5
Rhsim01G0022000 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.3e-25 119.8 101 66.3
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-24 117.9 130 49.2
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.4e-22 109.8 113 48.7
Rhsim02G0156500 Rhododendron simsii HOM05D007798 ORTHO05D023239 9.8e-22 108.2 62 85.5
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.3e-21 107.8 227 32.2
Rhsim06G0086000 Rhododendron simsii HOM05D007798 ORTHO05D023239 4.9e-21 105.9 60 90.0
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 6.4e-21 105.5 293 25.3
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.4e-20 103.6 108 49.1
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.4e-20 103.6 339 24.5
Rhsim01G0155300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-20 102.8 60 86.7
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.1e-20 102.1 213 36.6
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 2.1e-19 100.5 382 24.6
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.5e-19 99.8 333 23.7
Actinidia36705 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.8e-19 98.6 84 53.6
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-18 97.8 161 42.2
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.9e-18 96.3 161 41.6
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-18 95.9 161 41.6
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-17 94.4 161 39.1
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.5e-17 93.6 161 40.4
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 6.2e-16 89.0 100 43.0
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.2e-15 85.9 75 54.7
Rhsim06G0139800 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.2e-15 85.9 94 50.0
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-14 82.0 60 58.3
QL05p029849 Quercus lobata HOM05D007798 ORTHO05D009882 7.6e-14 82.0 82 43.9
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.7e-13 80.9 60 56.7
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.4e-13 78.6 60 55.0
Rhsim06G0087700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.4e-13 78.6 73 52.1
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.4e-12 77.8 105 39.0
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-12 77.0 60 53.3
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.3e-10 70.5 249 27.3
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.1e-09 68.2 89 39.3
Actinidia22667 Actinidia chinensis HOM05D002634 ORTHO05D003100 2.5e-09 67.0 57 61.4
Actinidia20115 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.3e-09 65.5 65 53.8
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 64.7 46 60.9
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-08 64.3 44 61.4
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.6e-08 64.3 90 36.7
Rhsim10G0117300 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.8e-08 63.5 74 45.9
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.2e-08 62.4 111 38.7
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.1e-07 61.6 61 45.9
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 1.4e-07 61.2 73 46.6
Rhsim02G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-07 61.2 32 90.6
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.2e-07 59.3 116 38.8
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-06 58.2 39 61.5
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-06 58.2 78 46.2
Hma1.2p1_0431F.1_g151610 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.6e-06 57.0 71 39.4
PGSC0003DMG400034893 Solanum tuberosum HOM05D008892 ORTHO05D010661 9.9e-06 55.1 96 34.4


User provided reference genes

Program Settings