Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.6e-300 1033.9 559 100.0
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.1e-173 614.0 398 83.4
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-151 540.0 347 86.7
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-149 532.3 556 63.8
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-146 523.9 556 63.8
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.2e-145 520.0 314 84.7
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-115 420.2 293 79.9
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.1e-115 419.5 553 46.8
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.5e-114 416.4 554 46.4
RhsimUnG0047100 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.2e-82 311.6 187 93.6
Rhsim04G0237400 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.1e-81 306.2 185 91.9
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.5e-80 304.7 333 53.2
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.7e-76 291.2 213 65.7
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.7e-76 291.2 213 65.7
Rhsim09G0060300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-55 219.9 142 90.1
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.6e-42 177.2 317 35.3
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.0e-36 156.8 115 67.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 5.2e-33 146.7 157 45.2
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.8e-33 146.4 167 42.5
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.8e-33 146.4 167 42.5
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.8e-33 146.4 167 42.5
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.7e-31 141.7 164 43.9
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.4e-30 137.9 205 40.0
Rhsim02G0149700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-30 137.1 123 61.8
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-29 135.6 482 28.0
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-29 135.6 324 29.9
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.5e-28 129.8 177 38.4
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.5e-27 128.6 529 26.8
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.2e-27 127.1 489 26.8
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.3e-25 121.3 125 46.4
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.8e-25 119.8 515 26.4
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 3.4e-24 117.5 323 28.5
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.7e-24 116.7 521 27.4
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.9e-23 113.6 517 25.3
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 6.3e-23 113.2 294 29.6
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 6.3e-23 113.2 326 28.2
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 8.3e-23 112.8 494 25.1
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 8.3e-23 112.8 344 26.2
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.4e-22 111.3 486 24.1
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.1e-22 109.4 314 26.8
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-21 109.0 311 31.2
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.6e-21 108.6 490 24.5
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.6e-21 108.6 320 30.3
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-20 104.4 315 29.2
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.8e-20 104.0 254 30.7
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-20 104.0 320 28.8
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-20 103.6 385 29.4
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.5e-19 102.1 294 26.9
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.9e-19 101.7 337 26.7
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.2e-19 100.5 244 29.5
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.5e-19 100.1 327 26.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 98.6 328 24.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.6e-18 98.6 489 25.4
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-18 98.2 328 24.7
Rhsim04G0116700 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.1e-18 98.2 48 89.6
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-18 97.8 328 24.7
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-18 97.8 328 24.7
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-18 97.4 328 24.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.1e-18 96.7 328 24.7
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-17 94.0 328 24.4
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.0e-17 94.0 426 24.4
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.8e-17 93.2 212 33.0
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.0e-16 91.7 254 30.3
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.7e-16 90.1 275 27.6
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.3e-15 89.0 350 23.7
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.9e-15 87.0 238 27.3
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-14 85.1 231 27.3
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.4e-14 84.7 275 27.6
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-14 84.3 369 25.2
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.2e-14 84.3 323 23.8
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-13 82.0 484 24.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-13 80.9 256 27.3
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.6e-13 80.5 160 33.8
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 5.9e-13 80.1 336 24.1
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 7.8e-13 79.7 312 26.0
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-12 79.3 238 26.1
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-12 78.2 153 34.6
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.3e-12 78.2 153 34.6
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 2.9e-12 77.8 232 25.0
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 3.9e-12 77.4 329 26.1
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 5.0e-12 77.0 315 25.1
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.0e-12 77.0 342 23.1
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.6e-12 76.3 432 24.8
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-12 76.3 153 34.0
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-11 75.5 244 25.4
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 1.5e-11 75.5 326 25.8
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 1.9e-11 75.1 193 29.5
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.3e-11 73.9 294 26.2
Migut.N00810 Erythranthe guttata HOM05D000791 ORTHO05D000669 5.6e-11 73.6 336 23.8
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.6e-11 73.6 128 29.7
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.3e-11 73.2 153 33.3
Migut.F01288 Erythranthe guttata HOM05D000791 ORTHO05D000669 1.2e-10 72.4 318 23.6
Sc14g0008150 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.8e-10 71.2 181 26.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.7e-10 70.5 156 31.4
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.2e-10 70.1 153 32.7
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.0e-10 69.7 161 26.1
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.0e-10 69.7 161 26.1
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-09 69.3 292 25.3
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-09 68.9 161 25.5
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-09 68.9 326 22.4
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-09 68.9 417 23.5
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-09 68.6 161 26.1
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-09 68.2 161 25.5
Aqoxy4G01021 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 4.0e-09 67.4 190 27.4
EL10Ac8g19925 Beta vulgaris HOM05D000107 ORTHO05D000062 4.0e-09 67.4 131 28.2
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-09 67.4 129 28.7
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.2e-09 67.0 129 28.7
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.8e-09 66.6 129 27.9
MBI18_g20995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.9e-09 66.2 213 24.4
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.9 129 27.1
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.2e-08 65.9 241 27.0
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.0e-08 65.1 277 24.9
Migut.O00380 Erythranthe guttata HOM05D023261 ORTHO05D000669 2.6e-08 64.7 124 31.5
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-08 64.7 311 25.4
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.4e-08 64.3 273 23.8
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 4.4e-08 63.9 124 35.5
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 9.8e-08 62.8 242 25.6
MBI16_g08490_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.8e-08 62.8 331 23.0
Rhsim07G0151700 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.8e-08 62.8 297 23.6
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.7e-07 62.0 134 30.6
MBI16_g11620_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-07 62.0 230 26.1
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-07 62.0 242 25.6
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 2.2e-07 61.6 234 24.8
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 61.2 113 37.2
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 3.7e-07 60.8 251 21.1
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 4.9e-07 60.5 234 26.1
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 4.9e-07 60.5 234 24.4
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 6.4e-07 60.1 234 24.4
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 8.3e-07 59.7 265 23.4
MBI09_g45689_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.3e-07 59.7 300 24.3
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 1.1e-06 59.3 224 24.6
MBI09_g30141_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 59.3 146 28.1
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 59.3 120 33.3
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 1.4e-06 58.9 234 24.4
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 1.4e-06 58.9 234 24.4
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.9e-06 58.5 110 38.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-06 57.0 300 23.7
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.4e-06 57.0 86 33.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.0e-06 56.6 334 24.3
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-06 56.6 142 28.2
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.2e-06 56.2 134 29.1


User provided reference genes

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