Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.4e-254 880.2 481 100.0
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-185 653.7 392 83.7
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.7e-114 415.2 379 57.5
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.4e-113 411.8 378 57.7
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.3e-77 294.7 374 45.2
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.1e-75 285.8 375 45.1
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 2.6e-41 174.1 414 32.6
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.4e-41 173.7 293 37.5
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.7e-38 164.1 385 32.5
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.1e-31 142.1 315 32.4
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.9e-20 104.8 317 25.2
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 5.6e-20 103.2 262 28.6
Rhsim08G0166700 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-18 99.0 139 42.4
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 3.1e-18 97.4 309 25.6
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 2.0e-17 94.7 288 24.7
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.7e-16 91.7 252 27.8
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 3.8e-16 90.5 290 28.3
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.2e-15 87.0 244 28.3
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 5.5e-15 86.7 352 25.3
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 5.5e-15 86.7 321 25.2
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 5.5e-15 86.7 277 26.0
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 7.1e-15 86.3 225 28.0
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 7.1e-15 86.3 270 25.9
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 9.3e-15 85.9 350 25.4
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 9.3e-15 85.9 325 23.1
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 2.7e-14 84.3 266 26.3
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 3.5e-14 84.0 163 31.3
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 6.0e-14 83.2 238 23.1
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 1.0e-13 82.4 274 24.8
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.3e-13 81.3 201 28.9
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 2.3e-13 81.3 229 25.8
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 3.9e-13 80.5 223 27.4
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 2.5e-12 77.8 234 26.1
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 4.3e-12 77.0 209 25.4
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 7.4e-12 76.3 161 28.6
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 9.6e-12 75.9 202 28.7
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 9.6e-12 75.9 254 26.0
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-11 75.5 295 24.7
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 2.8e-11 74.3 181 31.5
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.7e-11 73.9 164 33.5
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 3.7e-11 73.9 327 24.2
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 6.3e-11 73.2 202 28.2
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 8.2e-11 72.8 231 26.0
COL.COLO4_31618 Corchorus olitorius HOM05D044258 ORTHO05D044749 3.1e-10 70.9 188 24.5
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 6.9e-10 69.7 215 25.6
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 6.9e-10 69.7 278 25.2
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 9.0e-10 69.3 112 33.9
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 1.5e-09 68.6 200 25.0
Rhsim08G0164900 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.9e-09 66.6 112 40.2
Sp7g29610 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.7e-08 65.1 145 27.6
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 5.0e-08 63.5 231 25.1
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 5.0e-08 63.5 72 40.3
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 5.0e-08 63.5 273 23.4
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 6.5e-08 63.2 273 23.4
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-07 62.4 72 40.3
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.1e-07 62.4 237 28.3
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 1.1e-07 62.4 82 36.6
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-07 62.0 72 40.3
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-07 62.0 273 23.1
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 2.5e-07 61.2 250 22.4
COL.COLO4_20526 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.2e-07 60.8 208 28.4
Aqoxy7G03986 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 4.2e-07 60.5 117 32.5
Aqoxy7G03143 Aquilegia oxysepala HOM05D008418 ORTHO05D011146 1.2e-06 58.9 212 21.7
Rhsim08G0166800 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.5e-06 57.4 136 33.1
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 6.1e-06 56.6 114 28.9
A08p14570 Brassica napus HOM05D000249 ORTHO05D000206 6.1e-06 56.6 175 24.0
BraA08t33443Z Brassica rapa HOM05D000249 ORTHO05D000206 6.1e-06 56.6 175 24.0


User provided reference genes

Program Settings