Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0205300 Rhododendron simsii HOM05D003636 ORTHO05D005160 3.3e-77 291.6 140 100.0
Rhsim02G0033400 Rhododendron simsii HOM05D003636 ORTHO05D005160 4.6e-55 218.0 113 92.0
Rhsim07G0057600 Rhododendron simsii HOM05D003636 ORTHO05D005160 7.8e-55 217.2 113 90.3
vmacro15411 Vaccinium macrocarpon HOM05D003636 ORTHO05D005160 7.8e-55 217.2 110 93.6
CSS0043760 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 6.8e-51 204.1 113 82.3
Actinidia19047 Actinidia chinensis HOM05D003636 ORTHO05D005160 7.6e-50 200.7 113 81.4
CSS0010332 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 7.6e-50 200.7 113 80.5
CSS0030608 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 7.6e-50 200.7 113 80.5
CSS0023771 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 1.3e-49 199.9 113 80.5
Ciclev10004498m.g Citrus clementina HOM05D003636 ORTHO05D005160 1.7e-49 199.5 113 80.5
Ciclev10004361m.g Citrus clementina HOM05D003636 ORTHO05D005160 4.9e-49 198.0 113 80.5
CSS0034908 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 1.4e-48 196.4 113 79.6
Dinv44639 Davidia involucrata HOM05D003636 ORTHO05D005160 1.4e-48 196.4 113 79.6
MD16G1209600 Malus domestica HOM05D003636 ORTHO05D005160 1.6e-47 193.0 119 75.6
MBI11_g20311_MAGBIO Magnolia biondii HOM05D003636 ORTHO05D005160 2.7e-47 192.2 113 78.8
COL.COLO4_15803 Corchorus olitorius HOM05D003636 ORTHO05D005160 3.5e-47 191.8 111 81.1
Gohir.A06G066800 Gossypium hirsutum HOM05D003636 ORTHO05D005160 3.5e-47 191.8 113 78.8
Dinv44638 Davidia involucrata HOM05D003636 ORTHO05D005160 4.6e-47 191.4 113 79.6
GSVIVG01018130001 Vitis vinifera HOM05D003636 ORTHO05D005160 6.0e-47 191.0 113 77.9
MD13G1208100 Malus domestica HOM05D003636 ORTHO05D005160 7.8e-47 190.7 119 73.9
Oeu002605.1 Olea europaea HOM05D003636 ORTHO05D005160 1.0e-46 190.3 113 77.0
Prupe.1G031700 Prunus persica HOM05D003636 ORTHO05D005160 1.0e-46 190.3 119 75.6
AT1G56290 Arabidopsis thaliana HOM05D003636 ORTHO05D005160 1.3e-46 189.9 121 72.7
Aa31LG2G11570 Aethionema arabicum HOM05D003636 ORTHO05D005160 1.7e-46 189.5 121 72.7
BcaB07g31117 Brassica carinata HOM05D003636 ORTHO05D005160 1.7e-46 189.5 121 72.7
Manes.02G210300 Manihot esculenta HOM05D003636 ORTHO05D005160 2.3e-46 189.1 113 76.1
A09p19180 Brassica napus HOM05D003636 ORTHO05D005160 3.0e-46 188.7 121 71.9
TAR362G1191 Trochodendron aralioides HOM05D003636 ORTHO05D005160 3.0e-46 188.7 111 78.4
Gohir.D06G065300 Gossypium hirsutum HOM05D003636 ORTHO05D005160 3.9e-46 188.3 113 77.0
Hma1.2p1_1798F.1_g302870 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.9e-46 188.3 113 75.2
TPR.G13854 Trifolium pratense HOM05D003636 ORTHO05D005160 3.9e-46 188.3 119 73.1
AL1G65900 Arabidopsis lyrata HOM05D003636 ORTHO05D005160 5.1e-46 188.0 121 72.7
Carub.0002s0788 Capsella rubella HOM05D003636 ORTHO05D005160 5.1e-46 188.0 121 72.7
THA.LOC104801942 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 5.1e-46 188.0 119 72.3
Atru.chr4.2209 Acer truncatum HOM05D003636 ORTHO05D005160 6.6e-46 187.6 113 76.1
ATR0665G579 Amborella trichopoda HOM05D003636 ORTHO05D005160 6.6e-46 187.6 112 75.9
BcaC04g22040 Brassica carinata HOM05D003636 ORTHO05D005160 6.6e-46 187.6 121 71.1
C09p24190 Brassica napus HOM05D003636 ORTHO05D005160 6.6e-46 187.6 121 71.1
HanXRQChr06g0181471 Helianthus annuus HOM05D003636 ORTHO05D005160 8.6e-46 187.2 113 76.1
Lj2A972G23 Lonicera japonica HOM05D003636 ORTHO05D005160 8.6e-46 187.2 113 76.1
Peaxi162Scf00813g00221 Petunia axillaris HOM05D003636 ORTHO05D005160 8.6e-46 187.2 121 71.9
MSTRG.4105 Avicennia marina HOM05D003636 ORTHO05D005160 1.1e-45 186.8 113 75.2
HanXRQChr09g0258341 Helianthus annuus HOM05D003636 ORTHO05D005160 1.1e-45 186.8 112 75.9
CARHR289840 Cardamine hirsuta HOM05D003636 ORTHO05D005160 1.5e-45 186.4 121 72.7
Thhalv10023321m.g Eutrema salsugineum HOM05D003636 ORTHO05D005160 1.5e-45 186.4 121 71.9
TPR.G3263 Trifolium pratense HOM05D003636 ORTHO05D005160 1.5e-45 186.4 111 74.8
Cpa.g.sc58.55 Carica papaya HOM05D003636 ORTHO05D005160 2.5e-45 185.7 121 72.7
Migut.G00443 Erythranthe guttata HOM05D003636 ORTHO05D005160 3.3e-45 185.3 111 75.7
Hma1.2p1_1276F.1_g272050 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.3e-45 185.3 113 74.3
CDE06G0563 Ceratophyllum demersum HOM05D003636 ORTHO05D005160 4.3e-45 184.9 113 74.3
Gorai.010G076500 Gossypium raimondii HOM05D003636 ORTHO05D005160 4.3e-45 184.9 113 76.1
Nitab4.5_0000525g0280 Nicotiana tabacum HOM05D003636 ORTHO05D005160 4.3e-45 184.9 120 74.2
Nitab4.5_0001418g0070 Nicotiana tabacum HOM05D003636 ORTHO05D005160 4.3e-45 184.9 120 74.2
ECA233G4087 Erigeron canadensis HOM05D003636 ORTHO05D005160 5.6e-45 184.5 113 75.2
Manes.02G214300 Manihot esculenta HOM05D003636 ORTHO05D005160 7.3e-45 184.1 113 75.2
QL02p053474 Quercus lobata HOM05D003636 ORTHO05D005160 7.3e-45 184.1 119 72.3
Aqoxy2G03579 Aquilegia oxysepala HOM05D003636 ORTHO05D005160 9.6e-45 183.7 121 71.1
Eucgr.G02714 Eucalyptus grandis HOM05D003636 ORTHO05D005160 9.6e-45 183.7 113 74.3
Sopen09g032360 Solanum pennellii HOM05D003636 ORTHO05D005160 9.6e-45 183.7 111 73.9
THA.LOC104823115 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 9.6e-45 183.7 119 71.4
THA.LOC104823120 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 9.6e-45 183.7 119 71.4
CAN.G1007.10 Capsicum annuum HOM05D003636 ORTHO05D005160 1.2e-44 183.3 111 74.8
PGR142G0130 Punica granatum HOM05D003636 ORTHO05D005160 1.2e-44 183.3 113 73.5
Medtr1g107575 Medicago truncatula HOM05D003636 ORTHO05D005160 1.6e-44 183.0 119 70.6
SGA_v2.0_scaffold101G29798 Striga asiatica HOM05D003636 ORTHO05D005160 1.6e-44 183.0 113 73.5
Cc03_g04930 Coffea canephora HOM05D003636 ORTHO05D005160 2.1e-44 182.6 113 74.3
DCAR_024229 Daucus carota HOM05D003636 ORTHO05D005160 2.1e-44 182.6 113 73.5
Solyc09g083420.3 Solanum lycopersicum HOM05D003636 ORTHO05D005160 2.1e-44 182.6 111 73.9
TWI73G0437 Tripterygium wilfordii HOM05D003636 ORTHO05D005160 2.1e-44 182.6 113 73.5
EL10Ac2g04633 Beta vulgaris HOM05D003636 ORTHO05D005160 2.8e-44 182.2 121 71.1
Sabra16G0282600 Salix brachista HOM05D003636 ORTHO05D005160 2.8e-44 182.2 111 74.8
Ca_11090_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 3.6e-44 181.8 119 70.6
Cc01_g03130 Coffea canephora HOM05D003636 ORTHO05D005160 3.6e-44 181.8 113 75.2
Potri.001G415900 Populus trichocarpa HOM05D003636 ORTHO05D005160 3.6e-44 181.8 111 73.9
PGSC0003DMG400015117 Solanum tuberosum HOM05D003636 ORTHO05D005160 3.6e-44 181.8 111 73.0
arahy.Tifrunner.gnm1.ann1.7RJ7GD Arachis hypogaea HOM05D003636 ORTHO05D005160 6.2e-44 181.0 120 70.0
PSO170G0718 Papaver somniferum HOM05D003636 ORTHO05D005160 6.2e-44 181.0 112 75.0
arahy.Tifrunner.gnm1.ann1.T9EQBK Arachis hypogaea HOM05D003636 ORTHO05D005160 8.1e-44 180.6 120 70.0
Phvul.007G037800 Phaseolus vulgaris HOM05D003636 ORTHO05D005160 8.1e-44 180.6 119 69.7
Ca_11092_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 1.1e-43 180.3 119 69.7
Glyma.10G264200 Glycine max HOM05D003636 ORTHO05D005160 1.1e-43 180.3 119 70.6
Glyma.20G126100 Glycine max HOM05D003636 ORTHO05D005160 1.1e-43 180.3 119 70.6
Lalb_Chr21g0308481 Lupinus albus HOM05D003636 ORTHO05D005160 1.1e-43 180.3 119 71.4
SalBow2G0018 Salvia bowleyana HOM05D003636 ORTHO05D005160 1.4e-43 179.9 113 71.7
Sc13g0005100 Simmondsia chinensis HOM05D003636 ORTHO05D005160 1.4e-43 179.9 113 70.8
Lsat_1_v5_gn_5_72980 Lactuca sativa HOM05D003636 ORTHO05D005160 2.4e-43 179.1 114 73.7
VMungo0720G2747 Vigna mungo HOM05D003636 ORTHO05D005160 2.4e-43 179.1 119 68.9
PSO017G1763 Papaver somniferum HOM05D003636 ORTHO05D005160 3.1e-43 178.7 112 74.1
ClCG09G021970 Citrullus lanatus HOM05D003636 ORTHO05D005160 5.2e-43 177.9 119 69.7
Lj5g0001808 Lotus japonicus HOM05D003636 ORTHO05D005160 6.9e-43 177.6 119 68.9
Nitab4.5_0000026g0370 Nicotiana tabacum HOM05D003636 ORTHO05D005160 6.9e-43 177.6 119 71.4
Sed0019602 Sechium edule HOM05D003636 ORTHO05D005160 8.9e-43 177.2 111 73.0
Hund05016 Selenicereus undatus HOM05D003636 ORTHO05D005160 1.2e-42 176.8 121 68.6
AUR62014577 Chenopodium quinoa HOM05D003636 ORTHO05D005160 1.5e-42 176.4 121 67.8
AUR62039385 Chenopodium quinoa HOM05D003636 ORTHO05D005160 2.0e-42 176.0 121 67.8
Haze_11308 Corylus avellana HOM05D003636 ORTHO05D005160 2.0e-42 176.0 111 72.1
Haze_11311 Corylus avellana HOM05D003636 ORTHO05D005160 2.0e-42 176.0 111 72.1
MELO3C015028.2 Cucumis melo HOM05D003636 ORTHO05D005160 2.6e-42 175.6 119 68.1
CsaV3_5G014730 Cucumis sativus L. HOM05D003636 ORTHO05D005160 2.6e-42 175.6 119 68.1
Lj2g0003499 Lotus japonicus HOM05D003636 ORTHO05D005160 2.6e-42 175.6 119 68.1
Psat2g188400 Pisum sativum HOM05D003636 ORTHO05D005160 3.4e-42 175.3 113 69.9
Psat2g188680 Pisum sativum HOM05D003636 ORTHO05D005160 3.4e-42 175.3 113 69.9
Psat6g220520 Pisum sativum HOM05D003636 ORTHO05D005160 3.4e-42 175.3 113 69.9
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 4.4e-42 174.9 111 72.1
Rhsim03G0051600 Rhododendron simsii HOM05D003636 ORTHO05D005160 4.4e-42 174.9 112 77.7
unitig_736.g22446 Utricularia gibba HOM05D003636 ORTHO05D005160 4.4e-42 174.9 114 71.9
Hund02552 Selenicereus undatus HOM05D003636 ORTHO05D005160 7.6e-42 174.1 113 69.0
RcHm_v2.0_Chr5g0000461 Rosa chinensis HOM05D003636 ORTHO05D005160 9.9e-42 173.7 111 73.0
Hund11200 Selenicereus undatus HOM05D003636 ORTHO05D005160 9.9e-42 173.7 113 69.0
RcHm_v2.0_Chr4g0390791 Rosa chinensis HOM05D003636 ORTHO05D005160 1.3e-41 173.3 111 72.1
Dinv00242 Davidia involucrata HOM05D003636 ORTHO05D005160 2.2e-41 172.6 111 73.0
FvH4_4g02820 Fragaria vesca HOM05D003636 ORTHO05D005160 2.2e-41 172.6 113 71.7
FAN12G1487 Fragaria x ananassa HOM05D003636 ORTHO05D005160 2.2e-41 172.6 113 71.7
FAN17G1850 Fragaria x ananassa HOM05D003636 ORTHO05D005160 2.2e-41 172.6 113 71.7
Dinv02719 Davidia involucrata HOM05D003636 ORTHO05D005160 2.9e-41 172.2 111 71.2
Ah.09g223830 Amaranthus hybridus HOM05D003636 ORTHO05D005160 3.8e-41 171.8 113 68.1
SEGI_36314 Sequoiadendron giganteum HOM05D003636 ORTHO05D005160 8.4e-41 170.6 121 66.9
CiPaw.02G116000 Carya illinoinensis HOM05D003636 ORTHO05D005160 4.2e-40 168.3 120 65.8
EL10Ac2g03737 Beta vulgaris HOM05D003636 ORTHO05D005160 9.3e-40 167.2 125 65.6
Thecc.K0000100 Theobroma cacao HOM05D003636 ORTHO05D005160 2.1e-39 166.0 113 69.0
Rhsim03G0051200 Rhododendron simsii HOM05D003636 ORTHO05D005160 4.6e-39 164.9 89 87.6
EL10Ac2g04632 Beta vulgaris HOM05D003636 ORTHO05D005160 7.8e-39 164.1 112 67.0
Rhsim04G0219300 Rhododendron simsii HOM05D003636 ORTHO05D005160 1.3e-38 163.3 99 76.8
Psat0s986g0040 Pisum sativum HOM05D003636 ORTHO05D005160 2.3e-38 162.5 121 60.3
Hund02549 Selenicereus undatus HOM05D003636 ORTHO05D005160 3.0e-38 162.2 111 64.9
Zm00001eb056720 Zea mays HOM05D003636 ORTHO05D005160 3.3e-37 158.7 114 64.0
Mapoly0080s0020 Marchantia polymorpha HOM05D003636 ORTHO05D005160 5.6e-37 157.9 113 61.9
Os03g0740700 Oryza sativa ssp. japonica HOM05D003636 ORTHO05D005160 1.5e-34 149.8 113 61.9
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 7.6e-34 147.5 113 57.5
HPP92_018388 Vanilla planifolia HOM05D003636 ORTHO05D005160 1.3e-33 146.7 113 60.2
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 3.8e-33 145.2 110 60.0
CiPaw.02G115900 Carya illinoinensis HOM05D003636 ORTHO05D005160 1.9e-32 142.9 84 77.4
SpUn1110_0010 Schrenkiella parvula HOM05D003636 ORTHO05D005160 1.2e-31 140.2 88 73.9
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 1.0e-30 137.1 113 56.6
Rhsim10G0205200 Rhododendron simsii HOM05D003636 ORTHO05D005160 1.8e-30 136.3 71 87.3
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 6.7e-30 134.4 113 54.9
Haze_21469 Corylus avellana HOM05D003636 ORTHO05D005160 7.4e-29 131.0 92 60.9
RhsimUnG0153000 Rhododendron simsii HOM05D003636 ORTHO05D000058 1.6e-28 129.8 69 87.0
RhsimUnG0153100 Rhododendron simsii HOM05D003636 ORTHO05D000058 1.6e-28 129.8 69 87.0
ATR0691G272 Amborella trichopoda HOM05D003636 ORTHO05D005160 1.4e-27 126.7 119 57.1
AagrBONN_evm.TU.Sc2ySwM_228.671 Anthoceros agrestis HOM05D003636 ORTHO05D005160 1.8e-27 126.3 121 53.7
Hma1.2p1_2670F.1_g326620 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 1.2e-26 123.6 77 72.7
Cre17.g741550 Chlamydomonas reinhardtii HOM05D003636 ORTHO05D005160 4.5e-26 121.7 125 45.6
Duzib138G1962 Durio zibethinus HOM05D003636 ORTHO05D005160 1.7e-25 119.8 71 73.2
Nn1g02632 Nelumbo nucifera HOM05D003636 ORTHO05D005160 3.2e-24 115.5 61 85.2
PRCOL_00006475 Prasinoderma coloniale HOM05D003636 ORTHO05D005160 1.2e-23 113.6 111 51.4
MCO13G162 Micromonas commoda HOM05D003636 ORTHO05D005160 7.9e-23 110.9 110 47.3
QL06p015868 Quercus lobata HOM05D003636 ORTHO05D005160 1.6e-20 103.2 71 62.0
Lj2C973G0 Lonicera japonica HOM05D003636 ORTHO05D005160 6.2e-20 101.3 65 69.2
ATR0681G292 Amborella trichopoda HOM05D003636 ORTHO05D005160 9.0e-19 97.4 75 58.7
Actinidia05462 Actinidia chinensis HOM05D003636 ORTHO05D005160 1.3e-17 93.6 113 47.8
Cfa026320 Carpinus fangiana HOM05D003636 ORTHO05D005160 8.5e-09 64.3 135 33.3
TAR633G0237 Trochodendron aralioides HOM05D006365 ORTHO05D007893 3.6e-07 58.9 31 90.3


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