Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 5.8e-236 820.5 406 100.0
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 7.2e-186 654.1 400 79.8
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 8.0e-177 624.0 404 77.0
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.3e-176 622.5 401 76.3
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 6.8e-168 594.3 402 73.4
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.5e-167 593.2 406 67.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 9.2e-165 583.9 400 71.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 2.0e-164 582.8 405 70.1
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.9e-163 578.6 403 70.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.9e-163 578.6 378 73.3
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 6.6e-163 577.8 405 69.6
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.5e-162 576.6 401 72.3
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.6e-162 574.7 391 69.1
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 4.7e-161 571.6 401 69.1
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 4.7e-161 571.6 389 71.5
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 4.0e-160 568.5 375 80.0
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 3.4e-159 565.5 389 69.7
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 4.4e-159 565.1 401 68.3
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 4.9e-158 561.6 386 71.8
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 6.4e-158 561.2 395 70.9
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.4e-158 561.2 412 67.2
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 9.2e-157 557.4 411 66.2
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.1e-156 556.2 388 68.0
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.7e-156 555.8 397 68.8
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.3e-155 552.7 403 68.0
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.0e-155 552.4 401 67.1
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.9e-155 552.0 406 66.7
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.5e-154 550.1 370 71.9
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.5e-154 550.1 403 67.5
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 3.3e-154 548.9 399 66.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 9.5e-154 547.4 402 65.9
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.6e-153 545.4 439 65.1
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.4e-152 542.7 382 67.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 5.2e-152 541.6 399 66.2
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 6.8e-152 541.2 401 64.8
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 8.9e-152 540.8 401 64.8
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.2e-151 540.4 400 65.8
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.6e-151 539.3 400 65.2
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 5.8e-151 538.1 368 69.8
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 9.9e-151 537.3 399 66.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.2e-150 536.2 406 63.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.9e-150 535.8 375 66.7
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.4e-149 533.5 397 65.0
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 5.4e-149 531.6 405 64.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 7.1e-149 531.2 409 64.1
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.2e-148 530.4 396 63.9
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.7e-148 529.3 369 69.9
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 4.6e-148 528.5 396 64.6
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 7.8e-148 527.7 399 65.4
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.0e-147 527.3 411 64.2
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.7e-147 526.6 409 62.8
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 5.1e-147 525.0 409 63.8
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 6.6e-147 524.6 399 64.7
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.1e-146 523.9 402 64.4
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.6e-145 520.0 409 63.3
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.1e-145 519.6 411 62.5
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 8.1e-145 517.7 379 63.9
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.8e-144 516.5 401 63.8
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.0e-143 513.1 414 62.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 8.4e-142 507.7 405 61.5
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.1e-141 507.3 379 65.2
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.9e-141 506.5 411 58.6
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.9e-141 506.5 384 63.8
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 9.3e-141 504.2 377 63.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.7e-140 502.7 447 59.1
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 4.6e-140 501.9 408 62.3
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.0e-139 500.7 408 62.3
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.0e-139 500.7 408 62.3
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 7.3e-138 494.6 373 63.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.3e-137 493.8 380 64.5
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.1e-136 490.7 335 67.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 3.4e-135 485.7 445 56.9
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 4.5e-135 485.3 363 64.2
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.3e-134 483.8 369 61.5
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-132 477.2 397 60.7
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 4.6e-132 475.3 435 57.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.3e-129 467.2 402 59.2
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 6.2e-129 464.9 313 68.7
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 8.7e-123 444.5 286 71.3
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-122 444.1 295 70.8
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.3e-121 440.7 404 54.7
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.6e-121 440.3 428 52.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 7.6e-119 431.4 289 69.6
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 2.2e-118 429.9 388 54.1
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.0e-115 419.5 309 64.1
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 1.5e-114 417.2 304 64.5
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.7e-105 387.1 309 58.6
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 5.0e-94 349.0 288 66.3
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 7.4e-90 335.1 231 69.7
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.6e-87 326.6 280 58.2
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.2e-85 319.7 389 46.8
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 8.8e-83 311.6 248 64.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 8.3e-81 305.1 247 61.9
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.2e-78 297.0 280 55.7
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 5.0e-78 295.8 213 65.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.3e-70 270.4 375 39.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.6e-68 263.1 158 77.2
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 6.3e-65 252.3 206 57.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 2.0e-55 220.7 179 63.7
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.9e-48 197.6 416 33.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.1e-48 196.4 146 69.2
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.0e-47 192.6 159 61.6
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.2e-41 174.1 155 55.5
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.0e-30 137.1 104 67.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 2.2e-25 120.9 100 63.0
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 8.4e-25 119.0 78 70.5
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.1e-24 118.6 383 26.4
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 1.1e-21 108.6 414 27.8
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 9.6e-21 105.5 372 28.0
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.8e-19 101.3 372 25.5
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-18 98.6 68 66.2
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 3.2e-16 90.5 74 59.5
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 2.1e-15 87.8 75 52.0
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 7.4e-13 79.3 71 46.5
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.4e-11 75.1 68 52.9
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.9e-08 64.7 111 33.3
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 9.3e-08 62.4 82 51.2
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.0e-06 57.4 67 50.7
SEGI_39013 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 8.7e-06 55.8 147 28.6


User provided reference genes

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