Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-249 864.0 442 100.0
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-237 826.2 477 90.8
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-203 713.4 613 66.6
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-127 460.3 624 48.7
Rhsim05G0007500 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-120 435.3 281 86.1
Rhsim11G0186100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-90 336.7 338 62.1
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-72 277.7 175 77.1
RhsimUnG0085900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-49 199.5 428 38.1
Rhsim09G0015100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-38 164.9 311 43.1
Rhsim09G0077300 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-27 127.5 274 38.0
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.4e-27 126.7 80 70.0
RhsimUnG0177800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-24 118.2 160 46.9
Rhsim04G0035700 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-23 113.2 160 45.6
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 1.4e-20 105.1 421 27.8
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.3e-20 104.4 81 54.3
RhsimUnG0075300 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.8e-20 102.4 137 49.6
Rhsim07G0051900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.4e-19 100.1 206 39.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 7.5e-19 99.4 81 49.4
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.8e-18 97.4 83 53.0
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.4e-17 93.2 83 51.8
Rhsim02G0044900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-15 88.6 141 51.1
RhsimUnG0053300 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-15 87.0 139 42.4
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-15 86.7 263 31.6
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-15 86.3 177 34.5
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-13 80.1 62 56.5
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-13 80.1 669 23.5
Rhsim09G0039600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-12 78.2 146 43.2
RhsimUnG0000500 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.3e-12 77.8 156 35.9
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.0e-12 77.4 306 31.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 6.8e-12 76.3 460 25.4
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-11 75.5 132 34.1
Rhsim04G0148100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-11 75.1 81 49.4
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 7.5e-11 72.8 80 41.2
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-10 71.6 669 23.0
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.7e-10 70.5 114 34.2
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.7e-10 70.5 78 39.7
Rhsim12G0072300 Rhododendron simsii HOM05D000061 ORTHO05D000050 3.7e-10 70.5 234 29.5
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.4e-10 69.7 78 38.5
Rhsim01G0095600 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.8e-09 68.2 205 33.2
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-09 67.8 99 31.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.4e-09 67.8 101 34.7
Rhsim08G0017800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-09 67.8 172 34.9
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.2e-09 67.4 152 32.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.2e-09 67.4 95 34.7
Rhsim05G0208300 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.4e-09 66.6 97 43.3
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 7.0e-09 66.2 110 32.7
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.2e-09 65.9 111 31.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-08 65.5 97 30.9
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.6e-08 65.1 84 36.9
Lsat_1_v5_gn_6_74401 Lactuca sativa HOM05D003915 ORTHO05D005386 2.7e-08 64.3 106 35.8
Rhsim05G0211700 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.7e-08 64.3 147 36.1
Ah.06g183510 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-08 63.9 82 36.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.5e-08 63.9 144 27.8
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.6e-08 63.5 83 37.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.9e-08 63.2 84 35.7
Rhsim03G0183200 Rhododendron simsii HOM05D000071 ORTHO05D000029 5.9e-08 63.2 60 51.7
Phvul.001G152700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.8e-08 62.8 165 26.1
Rhsim13G0191800 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.8e-08 62.8 215 28.4
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 7.8e-08 62.8 96 31.2
FAN20G2064 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.0e-07 62.4 137 27.7
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 1.7e-07 61.6 85 31.8
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.7e-07 61.6 82 32.9
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.7e-07 61.6 135 28.1
RhsimUnG0038800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.7e-07 61.6 68 48.5
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 2.3e-07 61.2 82 35.4
Rhsim01G0085700 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.3e-07 61.2 97 42.3
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.0e-07 60.8 81 37.0
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-07 60.5 86 36.0
COL.COLO4_36277 Corchorus olitorius HOM05D008263 ORTHO05D009583 3.9e-07 60.5 81 32.1
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.0e-07 60.1 80 35.0
Lj5g0009491 Lotus japonicus HOM05D002777 ORTHO05D001516 5.0e-07 60.1 81 32.1
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.6e-07 59.3 81 34.6
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.6e-07 59.3 68 42.6
Ca_23900_v3 Cicer arietinum L. HOM05D004650 ORTHO05D005715 8.6e-07 59.3 113 27.4
Lsat_1_v5_gn_6_47180 Lactuca sativa HOM05D003915 ORTHO05D001516 8.6e-07 59.3 94 33.0
Manes.04G086301 Manihot esculenta HOM05D004650 ORTHO05D005715 8.6e-07 59.3 118 27.1
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.6e-07 59.3 324 28.4
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.1e-06 58.9 82 36.6
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-06 58.5 81 34.6
Rhsim02G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000031 1.5e-06 58.5 289 28.7
Atru.chr5.3088 Acer truncatum HOM05D004650 ORTHO05D005715 1.9e-06 58.2 118 27.1
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 1.9e-06 58.2 80 30.0
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-06 57.8 132 26.5
CDE02G0935 Ceratophyllum demersum HOM05D004650 ORTHO05D005715 2.5e-06 57.8 89 34.8
FAN15G0405 Fragaria x ananassa HOM05D004650 ORTHO05D005715 2.5e-06 57.8 142 25.4
MD17G1180400 Malus domestica HOM05D000428 ORTHO05D000582 2.5e-06 57.8 139 30.9
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.5e-06 57.8 77 36.4
FAN27G3342 Fragaria x ananassa HOM05D004650 ORTHO05D005715 3.3e-06 57.4 120 28.3
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 3.3e-06 57.4 180 26.1
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 3.3e-06 57.4 83 32.5
Actinidia15202 Actinidia chinensis HOM05D012898 ORTHO05D009356 4.3e-06 57.0 63 41.3
Lsat_1_v5_gn_2_14820 Lactuca sativa HOM05D002777 ORTHO05D001516 4.3e-06 57.0 101 31.7
Lsat_1_v5_gn_3_111820 Lactuca sativa HOM05D003915 ORTHO05D005386 4.3e-06 57.0 109 29.4
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 4.3e-06 57.0 118 29.7
Rhsim06G0241200 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.3e-06 57.0 252 26.6
Rhsim01G0138200 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.6e-06 56.6 254 24.8
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.6e-06 56.6 137 28.5
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.3e-06 56.2 63 36.5
Cfa005063 Carpinus fangiana HOM05D004650 ORTHO05D005715 7.3e-06 56.2 113 27.4
FAN24G0050 Fragaria x ananassa HOM05D004650 ORTHO05D005715 7.3e-06 56.2 111 27.9
Os04g0682400 Oryza sativa ssp. japonica HOM05D000428 ORTHO05D001253 7.3e-06 56.2 92 30.4
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-06 56.2 71 35.2
GSVIVG01024222001 Vitis vinifera HOM05D004650 ORTHO05D005715 7.3e-06 56.2 113 28.3
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.5e-06 55.8 56 41.1
DCAR_007593 Daucus carota HOM05D000428 ORTHO05D000582 9.5e-06 55.8 82 30.5
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 9.5e-06 55.8 84 28.6
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.5e-06 55.8 113 29.2


User provided reference genes

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