Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0181000 Rhododendron simsii HOM05D039283 ORTHO05D000177 6.6e-46 187.2 107 100.0
vmacro18521 Vaccinium macrocarpon HOM05D000294 ORTHO05D000177 3.4e-26 121.7 104 58.7
Phvul.008G238300 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 8.1e-20 100.5 104 45.2
Thecc.04G065400 Theobroma cacao HOM05D000294 ORTHO05D000177 2.4e-19 99.0 104 45.2
VMungo0647G2185 Vigna mungo HOM05D000294 ORTHO05D000177 2.4e-19 99.0 104 43.3
Gohir.A08G039200 Gossypium hirsutum HOM05D000294 ORTHO05D000177 2.0e-18 95.9 104 47.1
AUR62031495 Chenopodium quinoa HOM05D000294 ORTHO05D000177 3.4e-18 95.1 113 44.2
EL10Ac2g04245 Beta vulgaris HOM05D000294 ORTHO05D000177 5.8e-18 94.4 113 46.9
Glyma.02G243100 Glycine max HOM05D000294 ORTHO05D000177 7.6e-18 94.0 104 57.7
AUR62012367 Chenopodium quinoa HOM05D000294 ORTHO05D000177 9.9e-18 93.6 105 43.8
Duzib138G1364 Durio zibethinus HOM05D000294 ORTHO05D000177 1.3e-17 93.2 104 47.1
Gorai.004G048900 Gossypium raimondii HOM05D000294 ORTHO05D000177 1.3e-17 93.2 104 46.2
Manes.01G121150 Manihot esculenta HOM05D000294 ORTHO05D000177 1.1e-16 90.1 109 44.0
vmacro20636 Vaccinium macrocarpon HOM05D039283 ORTHO05D000177 1.1e-16 90.1 51 78.4
Lalb_Chr10g0104231 Lupinus albus HOM05D000294 ORTHO05D000177 1.4e-16 89.7 118 53.4
Gohir.D08G049400 Gossypium hirsutum HOM05D000294 ORTHO05D000177 1.9e-16 89.4 104 45.2
Hund15832 Selenicereus undatus HOM05D000294 ORTHO05D000177 3.5e-15 85.1 73 53.4
Rhsim08G0019900 Rhododendron simsii HOM05D015679 ORTHO05D017801 1.3e-14 83.2 52 69.2
Lalb_Chr17g0345981 Lupinus albus HOM05D000294 ORTHO05D000177 1.8e-14 82.8 115 41.7
Lj6g0009382 Lotus japonicus HOM05D000294 ORTHO05D000177 3.9e-14 81.6 105 39.0
GSVIVG01012050001 Vitis vinifera HOM05D000294 ORTHO05D000177 3.9e-14 81.6 104 40.4
arahy.Tifrunner.gnm1.ann1.QDSR5S Arachis hypogaea HOM05D000294 ORTHO05D000177 1.5e-13 79.7 109 39.4
arahy.Tifrunner.gnm1.ann1.YU3LHJ Arachis hypogaea HOM05D000294 ORTHO05D000177 1.9e-13 79.3 111 39.6
LjContig00141g0020132 Lotus japonicus HOM05D000294 ORTHO05D000177 5.6e-13 77.8 120 40.8
Lalb_Chr17g0345991 Lupinus albus HOM05D000294 ORTHO05D000177 5.6e-13 77.8 104 39.4
vmacro18520 Vaccinium macrocarpon HOM05D000294 ORTHO05D000177 5.6e-13 77.8 52 63.5
DCAR_001088 Daucus carota HOM05D000294 ORTHO05D000177 1.6e-12 76.3 112 35.7
TWI77G0264 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 3.7e-12 75.1 105 39.0
Medtr8g097310 Medicago truncatula HOM05D000294 ORTHO05D000177 4.8e-12 74.7 109 35.8
Sopen02g010840 Solanum pennellii HOM05D000294 ORTHO05D000177 8.2e-12 73.9 109 41.3
arahy.Tifrunner.gnm1.ann1.NBZU38 Arachis hypogaea HOM05D000294 ORTHO05D000177 2.4e-11 72.4 71 46.5
SalBow5G0576 Salvia bowleyana HOM05D000294 ORTHO05D000177 5.3e-11 71.2 108 41.7
Solyc02g032555.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 6.9e-11 70.9 109 39.4
Solyc02g033100.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 9.0e-11 70.5 109 40.4
Cc05_g03420 Coffea canephora HOM05D000294 ORTHO05D000177 1.5e-10 69.7 54 59.3
Solyc07g049130.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 1.5e-10 69.7 109 38.5
Sopen07g024560 Solanum pennellii HOM05D000294 ORTHO05D000177 1.5e-10 69.7 109 38.5
Solyc07g049120.2 Solanum lycopersicum HOM05D000294 ORTHO05D000177 2.6e-10 68.9 109 38.5
SGA_v2.0_scaffold313G48344 Striga asiatica HOM05D000294 ORTHO05D000177 2.6e-10 68.9 110 40.0
CAN.G834.8 Capsicum annuum HOM05D000294 ORTHO05D000177 3.4e-10 68.6 106 39.6
Migut.I00193 Erythranthe guttata HOM05D000294 ORTHO05D000177 7.6e-10 67.4 108 49.1
PGSC0003DMG400038899 Solanum tuberosum HOM05D000294 ORTHO05D000177 7.6e-10 67.4 109 39.4
vmacro20591 Vaccinium macrocarpon HOM05D039283 ORTHO05D000177 7.6e-10 67.4 39 76.9
Sopen02g011530 Solanum pennellii HOM05D000294 ORTHO05D000177 1.0e-09 67.0 109 37.6
Oeu016323.1 Olea europaea HOM05D000294 ORTHO05D000177 1.7e-09 66.2 109 38.5
CAN.G834.4 Capsicum annuum HOM05D000294 ORTHO05D000177 2.2e-09 65.9 106 39.6
Psat7g035600 Pisum sativum HOM05D000612 ORTHO05D000461 2.2e-09 65.9 113 33.6
Sopen02g011590 Solanum pennellii HOM05D000294 ORTHO05D000177 2.2e-09 65.9 109 37.6
Prupe.3G164700 Prunus persica HOM05D000294 ORTHO05D000177 2.5e-08 62.4 51 54.9
Solyc02g036170.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 2.5e-08 62.4 54 53.7
Solyc02g036230.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 4.2e-08 61.6 109 35.8
Solyc02g033120.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 5.5e-08 61.2 53 54.7
Solyc02g036140.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 5.5e-08 61.2 54 53.7
MD17G1254800 Malus domestica HOM05D000294 ORTHO05D000177 7.1e-08 60.8 54 51.9
Solyc02g033110.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 9.3e-08 60.5 53 52.8
Solyc02g036200.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 3.5e-07 58.5 54 51.9
Lalb_Chr10g0104221 Lupinus albus HOM05D000294 ORTHO05D000177 4.6e-07 58.2 113 31.9
arahy.Tifrunner.gnm1.ann1.RCY4IA Arachis hypogaea HOM05D000294 ORTHO05D000177 1.8e-06 56.2 58 44.8
TPR.G12853 Trifolium pratense HOM05D000294 ORTHO05D000177 6.7e-06 54.3 116 35.3


User provided reference genes

Program Settings